| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735141
Identifier: 187735141
GI number: 187735141
Start: 746797
End: 748044
Strand: Direct
Name: 187735141
Synonym: Amuc_0635
Alternate gene names: NA
Gene position: 746797-748044 (Clockwise)
Preceding gene: 187735140
Following gene: 187735143
Centisome position: 28.03
GC content: 54.25
Gene sequence:
>1248_bases ATGAAAGTTGATACTATTAAGGGAAGTTCCTATGTCATGACCTGTACAAAAGCTTGTACTGTAAGCGCCATCTTCAATTC CGGAGAGACGTCCATGCTTATTCTGGAAGCAGAGAAAAAAGGGCAATACGGTTTTGCAGCCCCGACGGACGCCGTCGAAG TATCCGATGAAGACGCCCTGATCACCCAGGTTTTCAAAACAGCCGTTCCAGGGTTGCCAGGCCAGAACGGCATCAGGCAA GGAGAAAATGCCGAATTAAAAAACCTGACGGCTGAGTCCGGGACTTTTGCAGGGGCCGTCAACGCCAACGGAGGCATCAA CATCCCGCTGGCCGTGGGGGCGGCAACGGATACGTCAGCGGTCAACCGCCTGTACGCCGCCGGGCTGGCTGCCGTCACTG ACGCTTTTTCCGTCAGGTGTTATCCGCTCCTGGCGGATTGCTCGTCTTCCAATGGGACGGTTTTCAAAACGGACAAGGAA CCCAATTCCCTTTATTTCAATGTCCCTCCCAATTCCGCCTTTACCGTGAAATGCGGCCTCGCGACCAACGCGAGGCCCAT GCACAATTATTCCAGCATCCGGGGTTGGGTGGCCCCGCTGCGACTGCCGTCTGTCAGCACGAAATTCACGGCCAGGTTCG GCCAGATGACAACGGTTGCGCGCATGGGGCGGGACAGGGACGCGTTTACGCTGGTGCCGGATCAGGCGGCTGGCGGCTAC AAGATTGGGGAGATTATCGATATTACGTTTGATCATGTCCGGGACGCGGACGCGGGAGGGTATCATATTCGCGTCCGGGA GATCTATTATTCCAATGCCGAGCAGAAATGGAAGATGAAGACGACGCAGGCCTTCGCGCAAGAGACGTCTTCCAATAACG GTTATCCCGTCTGCGTGTACGCGGTGGTTTACGAACAATACCAGGACGGAGGATATGATACTGAAGACAGGGGTGCGCTG TGGCTGCTGCATGGCGGGAATTCCTCCCGCAGCTGCGTCAAAATCGCCACGGTGAAGGGAGTCCATTGCTTTGAGAGTAT TTATCCATTTTCCGGGTACTATCTTGATATGGAGAATACCAACAGCTGGGCGTTGGCCGGAGCTTTCCTACCTGCGACGA TGCACTTGCATTGCAATAACGTCAATCCGGCGTATTACGGTTTTTCCTCCATGGAGAGCAATATCATTGTCTCCGAGGCG GTGGAGGATTTTGTTGACCCGGAAGCCGAAACAATTACCGAAGATTGA
Upstream 100 bases:
>100_bases CCGGAAAGAACCGCCCGCATACTTCTTCAGAAACGTCTCAACGTTTTATGCCTGATGATCTTTCCGGAGTTTTATCAATA GTTAAAAAAATAATTTATTT
Downstream 100 bases:
>100_bases GCATGAATGACGCAGCCTCCCCATTCCCGATACCCAGCAACACCTCTGCGTCCCTATTCAGTTTTTTTCCGCCACGGCAA CCGGGTTCCCGCCATCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MKVDTIKGSSYVMTCTKACTVSAIFNSGETSMLILEAEKKGQYGFAAPTDAVEVSDEDALITQVFKTAVPGLPGQNGIRQ GENAELKNLTAESGTFAGAVNANGGINIPLAVGAATDTSAVNRLYAAGLAAVTDAFSVRCYPLLADCSSSNGTVFKTDKE PNSLYFNVPPNSAFTVKCGLATNARPMHNYSSIRGWVAPLRLPSVSTKFTARFGQMTTVARMGRDRDAFTLVPDQAAGGY KIGEIIDITFDHVRDADAGGYHIRVREIYYSNAEQKWKMKTTQAFAQETSSNNGYPVCVYAVVYEQYQDGGYDTEDRGAL WLLHGGNSSRSCVKIATVKGVHCFESIYPFSGYYLDMENTNSWALAGAFLPATMHLHCNNVNPAYYGFSSMESNIIVSEA VEDFVDPEAETITED
Sequences:
>Translated_415_residues MKVDTIKGSSYVMTCTKACTVSAIFNSGETSMLILEAEKKGQYGFAAPTDAVEVSDEDALITQVFKTAVPGLPGQNGIRQ GENAELKNLTAESGTFAGAVNANGGINIPLAVGAATDTSAVNRLYAAGLAAVTDAFSVRCYPLLADCSSSNGTVFKTDKE PNSLYFNVPPNSAFTVKCGLATNARPMHNYSSIRGWVAPLRLPSVSTKFTARFGQMTTVARMGRDRDAFTLVPDQAAGGY KIGEIIDITFDHVRDADAGGYHIRVREIYYSNAEQKWKMKTTQAFAQETSSNNGYPVCVYAVVYEQYQDGGYDTEDRGAL WLLHGGNSSRSCVKIATVKGVHCFESIYPFSGYYLDMENTNSWALAGAFLPATMHLHCNNVNPAYYGFSSMESNIIVSEA VEDFVDPEAETITED >Mature_415_residues MKVDTIKGSSYVMTCTKACTVSAIFNSGETSMLILEAEKKGQYGFAAPTDAVEVSDEDALITQVFKTAVPGLPGQNGIRQ GENAELKNLTAESGTFAGAVNANGGINIPLAVGAATDTSAVNRLYAAGLAAVTDAFSVRCYPLLADCSSSNGTVFKTDKE PNSLYFNVPPNSAFTVKCGLATNARPMHNYSSIRGWVAPLRLPSVSTKFTARFGQMTTVARMGRDRDAFTLVPDQAAGGY KIGEIIDITFDHVRDADAGGYHIRVREIYYSNAEQKWKMKTTQAFAQETSSNNGYPVCVYAVVYEQYQDGGYDTEDRGAL WLLHGGNSSRSCVKIATVKGVHCFESIYPFSGYYLDMENTNSWALAGAFLPATMHLHCNNVNPAYYGFSSMESNIIVSEA VEDFVDPEAETITED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44838; Mature: 44838
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVDTIKGSSYVMTCTKACTVSAIFNSGETSMLILEAEKKGQYGFAAPTDAVEVSDEDAL CCEEEECCCCEEEEEECCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEECCCHHH ITQVFKTAVPGLPGQNGIRQGENAELKNLTAESGTFAGAVNANGGINIPLAVGAATDTSA HHHHHHHHCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEEECCCCEEEEEEEECCCCHHH VNRLYAAGLAAVTDAFSVRCYPLLADCSSSNGTVFKTDKEPNSLYFNVPPNSAFTVKCGL HHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEECCCCCCEEEECCCCCEEEEEECC ATNARPMHNYSSIRGWVAPLRLPSVSTKFTARFGQMTTVARMGRDRDAFTLVPDQAAGGY CCCCCCCCCHHHHHHEECEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCE KIGEIIDITFDHVRDADAGGYHIRVREIYYSNAEQKWKMKTTQAFAQETSSNNGYPVCVY ECCEEEEEEHHHCCCCCCCCEEEEEEEEEECCCCHHEEHHHHHHHHHHHCCCCCCEEEEE AVVYEQYQDGGYDTEDRGALWLLHGGNSSRSCVKIATVKGVHCFESIYPFSGYYLDMENT EEEHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCHHHHHHHCCCCCEEEEECCC NSWALAGAFLPATMHLHCNNVNPAYYGFSSMESNIIVSEAVEDFVDPEAETITED CCEEEEEEECEEEEEEEECCCCHHHEECCCCCCCEEHHHHHHHHHCCCHHHCCCC >Mature Secondary Structure MKVDTIKGSSYVMTCTKACTVSAIFNSGETSMLILEAEKKGQYGFAAPTDAVEVSDEDAL CCEEEECCCCEEEEEECCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEECCCHHH ITQVFKTAVPGLPGQNGIRQGENAELKNLTAESGTFAGAVNANGGINIPLAVGAATDTSA HHHHHHHHCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEEECCCCEEEEEEEECCCCHHH VNRLYAAGLAAVTDAFSVRCYPLLADCSSSNGTVFKTDKEPNSLYFNVPPNSAFTVKCGL HHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEECCCCCCEEEECCCCCEEEEEECC ATNARPMHNYSSIRGWVAPLRLPSVSTKFTARFGQMTTVARMGRDRDAFTLVPDQAAGGY CCCCCCCCCHHHHHHEECEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCE KIGEIIDITFDHVRDADAGGYHIRVREIYYSNAEQKWKMKTTQAFAQETSSNNGYPVCVY ECCEEEEEEHHHCCCCCCCCEEEEEEEEEECCCCHHEEHHHHHHHHHHHCCCCCCEEEEE AVVYEQYQDGGYDTEDRGALWLLHGGNSSRSCVKIATVKGVHCFESIYPFSGYYLDMENT EEEHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCHHHHHHHCCCCCEEEEECCC NSWALAGAFLPATMHLHCNNVNPAYYGFSSMESNIIVSEAVEDFVDPEAETITED CCEEEEEEECEEEEEEEECCCCHHHEECCCCCCCEEHHHHHHHHHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA