Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735133

Identifier: 187735133

GI number: 187735133

Start: 735567

End: 737087

Strand: Direct

Name: 187735133

Synonym: Amuc_0627

Alternate gene names: NA

Gene position: 735567-737087 (Clockwise)

Preceding gene: 187735132

Following gene: 187735134

Centisome position: 27.61

GC content: 54.64

Gene sequence:

>1521_bases
ATGAACCGAATCCTTCCATTACTATCCCTTCCCCTGCTGTCGCTCGCAGCGGTATTTGCCGCTAATACGCCGGAACACAT
CGGCAACGACCTCAAACTGTTCAAAGACTCCTCCTGCACCTCCCTGAAGCCGGATGTGAAAAACACCTCCGCCTTCCAGT
CTGACGCGATGAAGGAACTCGCGACCAAAATCCTGGCAGGCCATTACAAGCCGGACTACCTGTATGCCGAATACCGGGCC
CTCCCCTCACCGCGCCAGACGGGGAAAAATCTCAGAATCGGCGACGGATTCAGCAAATACGACAACATGACGGGCGTCTA
TCTGGAAAAGGGGAGGCATGTCGTCCTGGTCGGCAAGACGGAGGGGCAGGAAATCAGCCTCCTTCTGCCGAACCTGATGC
GCAAGCCGGCCGAAGGAGTGCAGCCCACAAAAGACCCCAACGGCTGGGGATTGCATAAAAAGCAGATTCCGCTCAAGGAA
GGAATCAACATCATTGACGTGGAAACGCCCGCCAACGCCTATATCAGCTATTTCACCGAAGACGCCGGCAAGGCGCCGAA
AATCCCCGTCCATTTCGTAACCGGCAAAGCCAACGGCTACTTTGACACCACCCGGGGCGACACCAACAAGGACTGGGTTC
GCCTGCTTGACCAGGCCGTCTCTCCGATCATGGATGCCCGGGGAAAATACATCCAGGTTGCCTACCCCGTAGAATTCCTG
AAAAAATTCACCAAAGACCGCGGAACCGAACTCATCAACGCCTACGACAAGCTCATCGGCATCCAATACCAGCTGATGGG
CCTGGATAAATACGGCAAAATCCCGGAAAACCGCGTCCTGGCCCGCGTGAACTTCAACTACTACATGTTCCGCGACGGAG
ACGGAGTCGCCTACCTCGGAAACGACGGGACAATGCGCATGGTAACCGACCCTGAAAACGTTCTCAAGGGCGATGCCTGC
TGGGGATTCTCCCACGAAGTCGGACACGTCATGCAAATGCGCCCGATGACCTGGGGCGGCATGACGGAAGTCAGCAACAA
CATCTTTTCCCTGCAGGCCGCAGCCAAAACAGGCAATGAAAGCCGCCTGAAGCGCCAGGGCAGCTACGACAAGGCGCGCA
AGGAAATCATCGAAGGGGAAATCGCCTACCTGCAATCTAAGGATGTCTTCAATAAGCTGGTTCCCCTGTGGCAGCTCCAT
CTTTACTTTACCAAAAACGGACACCCCGACTTCTATCCTGACGTCATGGAGTACCTGCGCAACAACGCGGGAAACTACGG
AGGGAACGACACCGTCAAATACCAGTTCGAATTCGTCAAGGCATGCTGTGACGTCACAAAAACCGACCTGACAGACTTCT
TTGAGAAATGGGGATTCTTCAAACCCGGAAAATTCCACATCGGCGACTATGCCCAGTACGACTTTAACGTCACCCCTGAA
ATGGTGGAGGAAACGAAAAAGTGGATTGCCGGCAAAGGCTACCCGAAACCCGAAACCGACATCACCGAACTAAGCGAGTA
A

Upstream 100 bases:

>100_bases
CTACCTGCCTATTTATTCATCAAGAGAAAAATAGTGAAAGAAGAAGAAAACGGAACCTGTATCTTGTAACATCACAGAAT
CACCTGCTTCCCGTACTGTC

Downstream 100 bases:

>100_bases
CGTGATTCGGCAATCCCGACGGTTCCCTTTAAATATCAAATATATCTGAAACTGGTAAAAAAGACTAACTATAGAGATTA
CAGATAAGGTTTCTCAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: S-Layer Domain Protein; S-Layer Domain-Containing Protein; Lipoprotein; Fibronectin Type III Domain-Containing Protein; F5/8 Type C Domain-Containing Protein

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MNRILPLLSLPLLSLAAVFAANTPEHIGNDLKLFKDSSCTSLKPDVKNTSAFQSDAMKELATKILAGHYKPDYLYAEYRA
LPSPRQTGKNLRIGDGFSKYDNMTGVYLEKGRHVVLVGKTEGQEISLLLPNLMRKPAEGVQPTKDPNGWGLHKKQIPLKE
GINIIDVETPANAYISYFTEDAGKAPKIPVHFVTGKANGYFDTTRGDTNKDWVRLLDQAVSPIMDARGKYIQVAYPVEFL
KKFTKDRGTELINAYDKLIGIQYQLMGLDKYGKIPENRVLARVNFNYYMFRDGDGVAYLGNDGTMRMVTDPENVLKGDAC
WGFSHEVGHVMQMRPMTWGGMTEVSNNIFSLQAAAKTGNESRLKRQGSYDKARKEIIEGEIAYLQSKDVFNKLVPLWQLH
LYFTKNGHPDFYPDVMEYLRNNAGNYGGNDTVKYQFEFVKACCDVTKTDLTDFFEKWGFFKPGKFHIGDYAQYDFNVTPE
MVEETKKWIAGKGYPKPETDITELSE

Sequences:

>Translated_506_residues
MNRILPLLSLPLLSLAAVFAANTPEHIGNDLKLFKDSSCTSLKPDVKNTSAFQSDAMKELATKILAGHYKPDYLYAEYRA
LPSPRQTGKNLRIGDGFSKYDNMTGVYLEKGRHVVLVGKTEGQEISLLLPNLMRKPAEGVQPTKDPNGWGLHKKQIPLKE
GINIIDVETPANAYISYFTEDAGKAPKIPVHFVTGKANGYFDTTRGDTNKDWVRLLDQAVSPIMDARGKYIQVAYPVEFL
KKFTKDRGTELINAYDKLIGIQYQLMGLDKYGKIPENRVLARVNFNYYMFRDGDGVAYLGNDGTMRMVTDPENVLKGDAC
WGFSHEVGHVMQMRPMTWGGMTEVSNNIFSLQAAAKTGNESRLKRQGSYDKARKEIIEGEIAYLQSKDVFNKLVPLWQLH
LYFTKNGHPDFYPDVMEYLRNNAGNYGGNDTVKYQFEFVKACCDVTKTDLTDFFEKWGFFKPGKFHIGDYAQYDFNVTPE
MVEETKKWIAGKGYPKPETDITELSE
>Mature_506_residues
MNRILPLLSLPLLSLAAVFAANTPEHIGNDLKLFKDSSCTSLKPDVKNTSAFQSDAMKELATKILAGHYKPDYLYAEYRA
LPSPRQTGKNLRIGDGFSKYDNMTGVYLEKGRHVVLVGKTEGQEISLLLPNLMRKPAEGVQPTKDPNGWGLHKKQIPLKE
GINIIDVETPANAYISYFTEDAGKAPKIPVHFVTGKANGYFDTTRGDTNKDWVRLLDQAVSPIMDARGKYIQVAYPVEFL
KKFTKDRGTELINAYDKLIGIQYQLMGLDKYGKIPENRVLARVNFNYYMFRDGDGVAYLGNDGTMRMVTDPENVLKGDAC
WGFSHEVGHVMQMRPMTWGGMTEVSNNIFSLQAAAKTGNESRLKRQGSYDKARKEIIEGEIAYLQSKDVFNKLVPLWQLH
LYFTKNGHPDFYPDVMEYLRNNAGNYGGNDTVKYQFEFVKACCDVTKTDLTDFFEKWGFFKPGKFHIGDYAQYDFNVTPE
MVEETKKWIAGKGYPKPETDITELSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57243; Mature: 57243

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRILPLLSLPLLSLAAVFAANTPEHIGNDLKLFKDSSCTSLKPDVKNTSAFQSDAMKEL
CCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH
ATKILAGHYKPDYLYAEYRALPSPRQTGKNLRIGDGFSKYDNMTGVYLEKGRHVVLVGKT
HHHHHHCCCCCCEEEHHHHCCCCHHHCCCCEEECCCHHHHCCCCEEEEECCCEEEEEECC
EGQEISLLLPNLMRKPAEGVQPTKDPNGWGLHKKQIPLKEGINIIDVETPANAYISYFTE
CCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCHHHHHEEC
DAGKAPKIPVHFVTGKANGYFDTTRGDTNKDWVRLLDQAVSPIMDARGKYIQVAYPVEFL
CCCCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH
KKFTKDRGTELINAYDKLIGIQYQLMGLDKYGKIPENRVLARVNFNYYMFRDGDGVAYLG
HHHHHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCEEEEEECEEEEEECCCCEEEEC
NDGTMRMVTDPENVLKGDACWGFSHEVGHVMQMRPMTWGGMTEVSNNIFSLQAAAKTGNE
CCCEEEEEECHHHHHCCCCCCCCCHHHHHHHEECCCCCCCHHHHCCCEEEEEEHHHCCCH
SRLKRQGSYDKARKEIIEGEIAYLQSKDVFNKLVPLWQLHLYFTKNGHPDFYPDVMEYLR
HHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHH
NNAGNYGGNDTVKYQFEFVKACCDVTKTDLTDFFEKWGFFKPGKFHIGDYAQYDFNVTPE
HCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEECCCEEEECCCCCHH
MVEETKKWIAGKGYPKPETDITELSE
HHHHHHHHHCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MNRILPLLSLPLLSLAAVFAANTPEHIGNDLKLFKDSSCTSLKPDVKNTSAFQSDAMKEL
CCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH
ATKILAGHYKPDYLYAEYRALPSPRQTGKNLRIGDGFSKYDNMTGVYLEKGRHVVLVGKT
HHHHHHCCCCCCEEEHHHHCCCCHHHCCCCEEECCCHHHHCCCCEEEEECCCEEEEEECC
EGQEISLLLPNLMRKPAEGVQPTKDPNGWGLHKKQIPLKEGINIIDVETPANAYISYFTE
CCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCHHHHHEEC
DAGKAPKIPVHFVTGKANGYFDTTRGDTNKDWVRLLDQAVSPIMDARGKYIQVAYPVEFL
CCCCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH
KKFTKDRGTELINAYDKLIGIQYQLMGLDKYGKIPENRVLARVNFNYYMFRDGDGVAYLG
HHHHHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCEEEEEECEEEEEECCCCEEEEC
NDGTMRMVTDPENVLKGDACWGFSHEVGHVMQMRPMTWGGMTEVSNNIFSLQAAAKTGNE
CCCEEEEEECHHHHHCCCCCCCCCHHHHHHHEECCCCCCCHHHHCCCEEEEEEHHHCCCH
SRLKRQGSYDKARKEIIEGEIAYLQSKDVFNKLVPLWQLHLYFTKNGHPDFYPDVMEYLR
HHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHH
NNAGNYGGNDTVKYQFEFVKACCDVTKTDLTDFFEKWGFFKPGKFHIGDYAQYDFNVTPE
HCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEECCCEEEECCCCCHH
MVEETKKWIAGKGYPKPETDITELSE
HHHHHHHHHCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA