Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735132

Identifier: 187735132

GI number: 187735132

Start: 735210

End: 735500

Strand: Direct

Name: 187735132

Synonym: Amuc_0626

Alternate gene names: NA

Gene position: 735210-735500 (Clockwise)

Preceding gene: 187735130

Following gene: 187735133

Centisome position: 27.6

GC content: 54.98

Gene sequence:

>291_bases
ATGTGCGCCAAGACCAGAGAAAAAGGAACACTAAAGAGGAACGCGCGGCAGGAACGCGATACCGCCGCCGGGCAGCCCGG
AAGGCTTCGGCCCAAAATTCAAACCAGCAAGAAACGTGCCCATCCGAATACGGATCCCCGGAAAAGCGCCCGCCGGAACC
GGGGAAAATATCCGGAAACGCGAAATCGTCTGAAAAATCCCTGCCGCACCGCCAAAGCCATTCCACACATCAACCGCCCG
GCCTCTCTTCTGACGAACTACCTGCCTATTTATTCATCAAGAGAAAAATAG

Upstream 100 bases:

>100_bases
GCCACGGCGCATACGGCACTCATCAAACACTTGAATACGGAATTCATCATCCTCTTCACCTTATTCCATTTTCCCCTGCC
GCACAACAACCATGTCATGC

Downstream 100 bases:

>100_bases
TGAAAGAAGAAGAAAACGGAACCTGTATCTTGTAACATCACAGAATCACCTGCTTCCCGTACTGTCATGAACCGAATCCT
TCCATTACTATCCCTTCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MCAKTREKGTLKRNARQERDTAAGQPGRLRPKIQTSKKRAHPNTDPRKSARRNRGKYPETRNRLKNPCRTAKAIPHINRP
ASLLTNYLPIYSSREK

Sequences:

>Translated_96_residues
MCAKTREKGTLKRNARQERDTAAGQPGRLRPKIQTSKKRAHPNTDPRKSARRNRGKYPETRNRLKNPCRTAKAIPHINRP
ASLLTNYLPIYSSREK
>Mature_96_residues
MCAKTREKGTLKRNARQERDTAAGQPGRLRPKIQTSKKRAHPNTDPRKSARRNRGKYPETRNRLKNPCRTAKAIPHINRP
ASLLTNYLPIYSSREK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11076; Mature: 11076

Theoretical pI: Translated: 12.10; Mature: 12.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCAKTREKGTLKRNARQERDTAAGQPGRLRPKIQTSKKRAHPNTDPRKSARRNRGKYPET
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCCCCCCHH
RNRLKNPCRTAKAIPHINRPASLLTNYLPIYSSREK
HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MCAKTREKGTLKRNARQERDTAAGQPGRLRPKIQTSKKRAHPNTDPRKSARRNRGKYPET
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCCCCCCHH
RNRLKNPCRTAKAIPHINRPASLLTNYLPIYSSREK
HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA