Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735065

Identifier: 187735065

GI number: 187735065

Start: 656940

End: 657164

Strand: Direct

Name: 187735065

Synonym: Amuc_0558

Alternate gene names: NA

Gene position: 656940-657164 (Clockwise)

Preceding gene: 187735059

Following gene: 187735066

Centisome position: 24.66

GC content: 51.11

Gene sequence:

>225_bases
ATGGGGAGTTCTGCCTACACGCACCGCCTGTTTCAGATCCATTGCGCAATCAAATTCATCATCAGGGAGGACAGGACCGG
GAACTGCACCATTTACGCAGACTGGCGGCGGAACCGTTCACCGGACAGGCTTCAGCTGGGAATTTCCGTGAGAGTATGCA
AAAAGAACGCAAGATATGGCTATCTTTATATAGGAAAGCGGCTGTTTCACTCCTGTTCCGGATGA

Upstream 100 bases:

>100_bases
AGAAATATTCCGGCATGAAAACGGCGATCGGGCAGGGAAGCTCCGTCGTAAAAAACGGCCCTTATCTCCGTCCCTGCAGT
AAATATTGAAGAAAAAAGAC

Downstream 100 bases:

>100_bases
TGGCCGAAGATTGCCGGATTCATGAACGGAAACCGGAAAGGGCCGACATTTTCAGCATTTTGTACGGAGTGCCGTTTTCC
AATGGGTTCCGGTAAAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MGSSAYTHRLFQIHCAIKFIIREDRTGNCTIYADWRRNRSPDRLQLGISVRVCKKNARYGYLYIGKRLFHSCSG

Sequences:

>Translated_74_residues
MGSSAYTHRLFQIHCAIKFIIREDRTGNCTIYADWRRNRSPDRLQLGISVRVCKKNARYGYLYIGKRLFHSCSG
>Mature_73_residues
GSSAYTHRLFQIHCAIKFIIREDRTGNCTIYADWRRNRSPDRLQLGISVRVCKKNARYGYLYIGKRLFHSCSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8670; Mature: 8539

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSSAYTHRLFQIHCAIKFIIREDRTGNCTIYADWRRNRSPDRLQLGISVRVCKKNARYG
CCCCHHHHHHHHHEEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCEE
YLYIGKRLFHSCSG
EEEECHHHHHCCCC
>Mature Secondary Structure 
GSSAYTHRLFQIHCAIKFIIREDRTGNCTIYADWRRNRSPDRLQLGISVRVCKKNARYG
CCCHHHHHHHHHEEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCEE
YLYIGKRLFHSCSG
EEEECHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA