Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735063

Identifier: 187735063

GI number: 187735063

Start: 655926

End: 656186

Strand: Reverse

Name: 187735063

Synonym: Amuc_0556

Alternate gene names: NA

Gene position: 656186-655926 (Counterclockwise)

Preceding gene: 187735064

Following gene: 187735062

Centisome position: 24.63

GC content: 56.32

Gene sequence:

>261_bases
ATGCCCATATACGAGTATATTTCTGAAAACCCTGACGACCCCGGACAGTCCTGTCCGGTGTGCCGCCGCGGTTTTGAGTT
GAGGCGTCCCGTGGACCGTGCTCCGCTTGAAAAATGCCTTGTGTGCAAGCATCCCGTGCGTAAGGTCATCAGCCGCATTA
ATGTGCCGGAGGTGACCAAGCCTCTTTCCGTTTCAGACGCCAAGGCTGCCGGATTCACCGTGCTGGAGCGCCGGGACAAG
GGCGTTTATGAAAAACTGTGA

Upstream 100 bases:

>100_bases
TCCCGGTGTGACCAAGTCCAGCTGGTAAGGACAGGAAAAGGTTGCAGCCTTATAAAGATTTTGACGCTAGGCTGATTTTT
ATTTAGCCTAGCGTTTTGCT

Downstream 100 bases:

>100_bases
TGACAAAGTGCCGGGCAATATCTCTGCCTTCTTCTCCGAATATATTATTTGAATCAGAATGAATGATCCGGATCCTCTGA
GTATTCTTGCGGCCTTCGGG

Product: regulatory protein, FmdB family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MPIYEYISENPDDPGQSCPVCRRGFELRRPVDRAPLEKCLVCKHPVRKVISRINVPEVTKPLSVSDAKAAGFTVLERRDK
GVYEKL

Sequences:

>Translated_86_residues
MPIYEYISENPDDPGQSCPVCRRGFELRRPVDRAPLEKCLVCKHPVRKVISRINVPEVTKPLSVSDAKAAGFTVLERRDK
GVYEKL
>Mature_85_residues
PIYEYISENPDDPGQSCPVCRRGFELRRPVDRAPLEKCLVCKHPVRKVISRINVPEVTKPLSVSDAKAAGFTVLERRDKG
VYEKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9768; Mature: 9637

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIYEYISENPDDPGQSCPVCRRGFELRRPVDRAPLEKCLVCKHPVRKVISRINVPEVTK
CCCHHHHCCCCCCCCCCCCHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PLSVSDAKAAGFTVLERRDKGVYEKL
CCCCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PIYEYISENPDDPGQSCPVCRRGFELRRPVDRAPLEKCLVCKHPVRKVISRINVPEVTK
CCHHHHCCCCCCCCCCCCHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PLSVSDAKAAGFTVLERRDKGVYEKL
CCCCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA