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The map label for this gene is yraN [C]

Identifier: 187735060

GI number: 187735060

Start: 653427

End: 653783

Strand: Reverse

Name: yraN [C]

Synonym: Amuc_0553

Alternate gene names: 187735060

Gene position: 653783-653427 (Counterclockwise)

Preceding gene: 187735061

Following gene: 187735057

Centisome position: 24.54

GC content: 59.94

Gene sequence:

>357_bases
ATGTACGGGGAACTGGCTGCGGCCTCCTTCCTGCGTGCGGAAGGGTGCGTTATCCTGAGGAGAAACTGGCGTCCCGTCAG
AGGCGGAGAGCTGGACATTGTGTGCCGGGAAGGGGAGTGCCTGGTTTTTGTGGAGGTGAAAACCCGTACGGGGAATGGTT
ATGGAGGTGCCCGCCGCGCTGTGAATGCCCGTAAAAGGGCGCTGATACGCCGGGGAGCGGCGGAATGGCTTCGCCTGCTT
CCGGAACCGGTGAATTCCCGTTACGATGTTGTGGAAGTCCTGTACAGGGAAGGGATGCCTCCGGAATTCAGACATATCCG
CGGAGCATTCGGGGCGAAGGATTTGCCCGCTTCATGA

Upstream 100 bases:

>100_bases
CATGGGCCCTGTCCGCTCCATCGCCGCTCGTTTGCGCCGGTTTCACAAATGGAACTGTCCATCCCTGAGCAGGGGTAAGC
GGGATACGGCATGGCTGGGA

Downstream 100 bases:

>100_bases
AAAGACGGCAGGGAAAGGCGGGAAGGAAACGCGGCGGATACGGAGCTCAGGTCGCGAAGCCCTGCCGCAGTGGACGGGAC
AATCTCTTCAGCCCCGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MYGELAAASFLRAEGCVILRRNWRPVRGGELDIVCREGECLVFVEVKTRTGNGYGGARRAVNARKRALIRRGAAEWLRLL
PEPVNSRYDVVEVLYREGMPPEFRHIRGAFGAKDLPAS

Sequences:

>Translated_118_residues
MYGELAAASFLRAEGCVILRRNWRPVRGGELDIVCREGECLVFVEVKTRTGNGYGGARRAVNARKRALIRRGAAEWLRLL
PEPVNSRYDVVEVLYREGMPPEFRHIRGAFGAKDLPAS
>Mature_118_residues
MYGELAAASFLRAEGCVILRRNWRPVRGGELDIVCREGECLVFVEVKTRTGNGYGGARRAVNARKRALIRRGAAEWLRLL
PEPVNSRYDVVEVLYREGMPPEFRHIRGAFGAKDLPAS

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 13259; Mature: 13259

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGELAAASFLRAEGCVILRRNWRPVRGGELDIVCREGECLVFVEVKTRTGNGYGGARRA
CCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCHHHHH
VNARKRALIRRGAAEWLRLLPEPVNSRYDVVEVLYREGMPPEFRHIRGAFGAKDLPAS
HHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MYGELAAASFLRAEGCVILRRNWRPVRGGELDIVCREGECLVFVEVKTRTGNGYGGARRA
CCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCHHHHH
VNARKRALIRRGAAEWLRLLPEPVNSRYDVVEVLYREGMPPEFRHIRGAFGAKDLPAS
HHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA