| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735055
Identifier: 187735055
GI number: 187735055
Start: 648327
End: 649118
Strand: Reverse
Name: 187735055
Synonym: Amuc_0548
Alternate gene names: NA
Gene position: 649118-648327 (Counterclockwise)
Preceding gene: 187735056
Following gene: 187735054
Centisome position: 24.37
GC content: 56.57
Gene sequence:
>792_bases ATGAAGAACCTTTTTAGACTGGGTTTCCGTTTCGTTGCATTTGCTTCCGTCCTGATGGCTGCGTTTTCTACATCCGCTTT CGCTCAGGAAGCCGCCGAAGCCGTTGCCCCGCAGGAACAGACCATGCTTGACAAATGGATCATCGCCGGTGGTTGGACCA TGATTCCGATTATGCTGGTGGAAGCTTTCATCATTTTCCTGGTGATTTACAACATGGTAGCCCTGAAAAAGGAAAAATTC TGCCCGGAAGATCTCAAGGTCACTCTGTTGCAGCTGATGGCCGAATGCCGCATCCGGTCCGCCATTGAAGTTGCGGCCGG CAGTCCCACCTATTTGGGCCGTCTGGTTGCCTACGCCCTGCCGAATGTGGACGCTACCCGTCCGGAAGACCTCGGCAAAG ATGCTATTGAAGACGCCGTGGCCGACTTTACGGCCAATGAAAGCCGTTCCGTGTTCAAATGGATCAACATGCTGGCCCTT TGCGCGCAGATTTCTCCCATGCTCGGCCTGTTCGGGACGGTGCAGGGGATGGTGGGCGCGTTCGGGACGCTGGCTACCGC CGGCCAGGCGGACCCCACCCAGCTGGCCGGTGACATTTCCGTGGCTCTTCTGACAACGTTCTGGGGATTGATCAACGCCA TTATCGCCACTCCGTTCTTCTTCTTCCAGAAGGGCATTGCCAACGCCCAGATTGCCGAATGTGTGGGCACTGTGCAGGAA ATGGTGAACACCTCCATCAACGTGGTGAATGCCGAAGCCCAGCTTGCCCGCATCCCCGAAGGCCTGGCCTGA
Upstream 100 bases:
>100_bases GCGTCTGAATTTTTTACAGGGTCTAAAATGATGCTTGCAAGTCTGAATTTGCATGCTTTAATACACCAGTATCTTTTCGA ACAACCATATAACTTAAATT
Downstream 100 bases:
>100_bases TTGCCGGAACAGGCGGTCCGGCCCGGAAGCGTCCGCTCAGTCGGAACCGGGCCGGAGAACCTCAACAAAATGTAGCTTAT GGGTAAGAAAAAAGCTAATG
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel Family Protein; Biopolymer Transport Protein ExbB; Biopolymer Transport ExbB Protein; ExbB-Like Biopolymer Transport; Biopolymer Transport ExbB-Like Transmembrane Protein; Transporter MotA/lQ/ExbB Proton Channel Family Protein; MotA/lQ/ExbB Proton Channel Family Domain Protein; Biopolymer Transporter ExbB; Transporter MotA/lQ/ExbB Proton Channel Family; Biopolymer Transport Channel Protein; LQ Protein; Biopolymer Transport Protein lR; Mota/lq/Exbb Proton Channel
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKNLFRLGFRFVAFASVLMAAFSTSAFAQEAAEAVAPQEQTMLDKWIIAGGWTMIPIMLVEAFIIFLVIYNMVALKKEKF CPEDLKVTLLQLMAECRIRSAIEVAAGSPTYLGRLVAYALPNVDATRPEDLGKDAIEDAVADFTANESRSVFKWINMLAL CAQISPMLGLFGTVQGMVGAFGTLATAGQADPTQLAGDISVALLTTFWGLINAIIATPFFFFQKGIANAQIAECVGTVQE MVNTSINVVNAEAQLARIPEGLA
Sequences:
>Translated_263_residues MKNLFRLGFRFVAFASVLMAAFSTSAFAQEAAEAVAPQEQTMLDKWIIAGGWTMIPIMLVEAFIIFLVIYNMVALKKEKF CPEDLKVTLLQLMAECRIRSAIEVAAGSPTYLGRLVAYALPNVDATRPEDLGKDAIEDAVADFTANESRSVFKWINMLAL CAQISPMLGLFGTVQGMVGAFGTLATAGQADPTQLAGDISVALLTTFWGLINAIIATPFFFFQKGIANAQIAECVGTVQE MVNTSINVVNAEAQLARIPEGLA >Mature_263_residues MKNLFRLGFRFVAFASVLMAAFSTSAFAQEAAEAVAPQEQTMLDKWIIAGGWTMIPIMLVEAFIIFLVIYNMVALKKEKF CPEDLKVTLLQLMAECRIRSAIEVAAGSPTYLGRLVAYALPNVDATRPEDLGKDAIEDAVADFTANESRSVFKWINMLAL CAQISPMLGLFGTVQGMVGAFGTLATAGQADPTQLAGDISVALLTTFWGLINAIIATPFFFFQKGIANAQIAECVGTVQE MVNTSINVVNAEAQLARIPEGLA
Specific function: Unknown
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28343; Mature: 28343
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLFRLGFRFVAFASVLMAAFSTSAFAQEAAEAVAPQEQTMLDKWIIAGGWTMIPIMLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH EAFIIFLVIYNMVALKKEKFCPEDLKVTLLQLMAECRIRSAIEVAAGSPTYLGRLVAYAL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC PNVDATRPEDLGKDAIEDAVADFTANESRSVFKWINMLALCAQISPMLGLFGTVQGMVGA CCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTLATAGQADPTQLAGDISVALLTTFWGLINAIIATPFFFFQKGIANAQIAECVGTVQE HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH MVNTSINVVNAEAQLARIPEGLA HHHCHHHEECHHHHHHHCCCCCC >Mature Secondary Structure MKNLFRLGFRFVAFASVLMAAFSTSAFAQEAAEAVAPQEQTMLDKWIIAGGWTMIPIMLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH EAFIIFLVIYNMVALKKEKFCPEDLKVTLLQLMAECRIRSAIEVAAGSPTYLGRLVAYAL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC PNVDATRPEDLGKDAIEDAVADFTANESRSVFKWINMLALCAQISPMLGLFGTVQGMVGA CCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTLATAGQADPTQLAGDISVALLTTFWGLINAIIATPFFFFQKGIANAQIAECVGTVQE HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH MVNTSINVVNAEAQLARIPEGLA HHHCHHHEECHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA