| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735054
Identifier: 187735054
GI number: 187735054
Start: 647742
End: 648248
Strand: Reverse
Name: 187735054
Synonym: Amuc_0547
Alternate gene names: NA
Gene position: 648248-647742 (Counterclockwise)
Preceding gene: 187735055
Following gene: 187735053
Centisome position: 24.33
GC content: 51.48
Gene sequence:
>507_bases ATGGGTAAGAAAAAAGCTAATGTAGCGCCTGAAGAAGAAAATGGGGAAATGGATATGTCCCCCATGATCGACATGGTTTT CCTCCTGTTGATTTTCTTCGTGGTGAACGCTACGGCCATTACCGTTAAAAAGGATAAGAACATTCAGATGCCCACGGCCA GCAGCTCCGGTGAAGTGAAATCCGCCAACGGCTGCATTGTGGTGAATGTTTATGGGGAAGGTGCGGGTAAGCGGCCGCCC GGCGTAGATCCCAGCGTTCTCTGGTCCTCCGACGTAGGCACTCCGCTCAATTCCTTTGATGAACTCAAGGAATACATCAA AAACCTTGCGGAACGCTTCAAGGACAAGCAGGATTTTGAAACGCGTCTCTATCTGCGCGGTGACCAGCAGGCTCTGTTCA AAGGCTCCCGGGAAGTAATCCGCGCGGCTGCGGAATGCGGCGTAGTCAAAGTGATCTTTGCCGTACTGCCTGCCAAGAAT TCCTCTCCTGCAACCAAGGCTGAATAA
Upstream 100 bases:
>100_bases CATCCCCGAAGGCCTGGCCTGATTGCCGGAACAGGCGGTCCGGCCCGGAAGCGTCCGCTCAGTCGGAACCGGGCCGGAGA ACCTCAACAAAATGTAGCTT
Downstream 100 bases:
>100_bases CATTACGCGCTATGGCAAGACATAAAAAACTGGAAACGGTTGAGGATGAAGATCCCAAGCTGGATATTTCCTCTCTCATC GACGTATGTTTCCTTCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MGKKKANVAPEEENGEMDMSPMIDMVFLLLIFFVVNATAITVKKDKNIQMPTASSSGEVKSANGCIVVNVYGEGAGKRPP GVDPSVLWSSDVGTPLNSFDELKEYIKNLAERFKDKQDFETRLYLRGDQQALFKGSREVIRAAAECGVVKVIFAVLPAKN SSPATKAE
Sequences:
>Translated_168_residues MGKKKANVAPEEENGEMDMSPMIDMVFLLLIFFVVNATAITVKKDKNIQMPTASSSGEVKSANGCIVVNVYGEGAGKRPP GVDPSVLWSSDVGTPLNSFDELKEYIKNLAERFKDKQDFETRLYLRGDQQALFKGSREVIRAAAECGVVKVIFAVLPAKN SSPATKAE >Mature_167_residues GKKKANVAPEEENGEMDMSPMIDMVFLLLIFFVVNATAITVKKDKNIQMPTASSSGEVKSANGCIVVNVYGEGAGKRPPG VDPSVLWSSDVGTPLNSFDELKEYIKNLAERFKDKQDFETRLYLRGDQQALFKGSREVIRAAAECGVVKVIFAVLPAKNS SPATKAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18289; Mature: 18158
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKKANVAPEEENGEMDMSPMIDMVFLLLIFFVVNATAITVKKDKNIQMPTASSSGEVK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCCCCEE SANGCIVVNVYGEGAGKRPPGVDPSVLWSSDVGTPLNSFDELKEYIKNLAERFKDKQDFE CCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCC TRLYLRGDQQALFKGSREVIRAAAECGVVKVIFAVLPAKNSSPATKAE EEEEEECCHHHHHHCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GKKKANVAPEEENGEMDMSPMIDMVFLLLIFFVVNATAITVKKDKNIQMPTASSSGEVK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCCCCEE SANGCIVVNVYGEGAGKRPPGVDPSVLWSSDVGTPLNSFDELKEYIKNLAERFKDKQDFE CCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCC TRLYLRGDQQALFKGSREVIRAAAECGVVKVIFAVLPAKNSSPATKAE EEEEEECCHHHHHHCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA