| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735045
Identifier: 187735045
GI number: 187735045
Start: 633838
End: 634311
Strand: Reverse
Name: 187735045
Synonym: Amuc_0538
Alternate gene names: NA
Gene position: 634311-633838 (Counterclockwise)
Preceding gene: 187735046
Following gene: 187735038
Centisome position: 23.81
GC content: 57.81
Gene sequence:
>474_bases ATGATGCTAAAGGAAAAAATCGTCCGTTTCTGTTTGCTCCTGCTCCGGCTGGGGATGGGGGGCTTCTTCCTTTTTGTCGC GGCGCGCAAGCTGCTTCATCTGGACCAGCTTCAGGAGACGATCGACCGTTTCGCCATTTTCCCGGAGGCCTGGGGGCATC CTCTGGCCTGCCTGGGAGTGTCGTGCGAGATTGCGGTTGGCCTGGGGCTTCTGTTCCGCAGAACCTGCGCCGGGGCCGCG CTGCTGGGCAGTGCGCTTACGTTCACGTTCGTGGCGTTGTTCGTCCAGGGCTGGGCCAGGGGGCTTTCCCTTTCCTGCAA CTGCATCGGTGTGGAGAGGGTGGTAACCAGCTATCCCTTTGAAGTGGCTTGGAGACTGGTCCTCTTTTTCCTCATGCTGA TTCTCCTGTGGGATTCCTGCCGGAAGGGAAAAACGTACTTTAATGTGACCCGGCTGGATTTCAGTGAAATGTGA
Upstream 100 bases:
>100_bases CTTCAGATGGAGCTGGAAAAAGTGCGCCATGAACTGAACAGGTTGCGCAATGAAAAAGTGAGCGCCCAGCAAACCCACTT CGAATAATCGGAATACGCCA
Downstream 100 bases:
>100_bases CCGGGAGAAAGAGTTCCGGCCGGTTTCCGGCCTGTAATGGTTTCCGGGAAAATATTCCGGAAAAGGAAGCCAGGGGCCGG AAAACAGGAAGCACCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MMLKEKIVRFCLLLLRLGMGGFFLFVAARKLLHLDQLQETIDRFAIFPEAWGHPLACLGVSCEIAVGLGLLFRRTCAGAA LLGSALTFTFVALFVQGWARGLSLSCNCIGVERVVTSYPFEVAWRLVLFFLMLILLWDSCRKGKTYFNVTRLDFSEM
Sequences:
>Translated_157_residues MMLKEKIVRFCLLLLRLGMGGFFLFVAARKLLHLDQLQETIDRFAIFPEAWGHPLACLGVSCEIAVGLGLLFRRTCAGAA LLGSALTFTFVALFVQGWARGLSLSCNCIGVERVVTSYPFEVAWRLVLFFLMLILLWDSCRKGKTYFNVTRLDFSEM >Mature_157_residues MMLKEKIVRFCLLLLRLGMGGFFLFVAARKLLHLDQLQETIDRFAIFPEAWGHPLACLGVSCEIAVGLGLLFRRTCAGAA LLGSALTFTFVALFVQGWARGLSLSCNCIGVERVVTSYPFEVAWRLVLFFLMLILLWDSCRKGKTYFNVTRLDFSEM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17710; Mature: 17710
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLKEKIVRFCLLLLRLGMGGFFLFVAARKLLHLDQLQETIDRFAIFPEAWGHPLACLGV CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHCC SCEIAVGLGLLFRRTCAGAALLGSALTFTFVALFVQGWARGLSLSCNCIGVERVVTSYPF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCH EVAWRLVLFFLMLILLWDSCRKGKTYFNVTRLDFSEM HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCC >Mature Secondary Structure MMLKEKIVRFCLLLLRLGMGGFFLFVAARKLLHLDQLQETIDRFAIFPEAWGHPLACLGV CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHCC SCEIAVGLGLLFRRTCAGAALLGSALTFTFVALFVQGWARGLSLSCNCIGVERVVTSYPF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCH EVAWRLVLFFLMLILLWDSCRKGKTYFNVTRLDFSEM HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA