| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735043
Identifier: 187735043
GI number: 187735043
Start: 631559
End: 632338
Strand: Direct
Name: 187735043
Synonym: Amuc_0536
Alternate gene names: NA
Gene position: 631559-632338 (Clockwise)
Preceding gene: 187735042
Following gene: 187735044
Centisome position: 23.71
GC content: 58.21
Gene sequence:
>780_bases ATGACAGATACGGCCCTCATCGGTTCTTCTTGCGCCCTCGGCGTTTTCTGGTCCTCAAAACGGTACTTTGACTACCTGAT TGATGAAACCAACCTGTCCCTGCTGCGCGGCAAGGAATTCGGGCAGGCCGTCATTATCTGTCCCTCCCTCCGGGAAGGGG GCACGGCCATTCGGGGGAATACGGCTCCCTTTCTGGCTCAGGTTAAAACCCTGATTGATCTCCTGCATGAGGTGAAGGCG GAACGGGTGACCTACATCACCAGCATTGACACCCAGCCGGAAACGGGAAATGAACTTTCTCCCTTGCTCCGAGAAACGGA GGACGAATGGCTGGCGGCTCTGGTAGAGCTGAAAGACTTCATCAACCTCCGGTTCGGCCGCGTGCTGAACGTTTACCTTC CGGAAGTCACCGGAACGGGAGCAGGCATGAGTGTGGCGGATCTGCTGGCAGCAGTTCCGGAAGGGACGGAAGAGCTGGAC GTAGCCCTGCTGGAACGCCACCAGCTTTATCCCATGCACCGCCTGGTCAGGGATGTGGAAAAAGCATGGGAGTGCGGCAT CTTTTCCGTGAATCTGGTGCCGGAACCCGTCACGGCCTTTGAACTGGTGGAGCAGTGCTTCCCTTCCCTGGTCAACCGCC TCCCCGTCGCGAAGGAAACGGACCCGTACGGGAGCGCCAGAACATCCGTTTACTCCACGCAGTACCACGATCCGGACACC GGTTATATCATGGACAAGCAGGACGTCCTGGCGGGGCTCTCTCCGGACAAACAGTCCTAG
Upstream 100 bases:
>100_bases AACGAAGACTGGGGCTGGGGGTACTTCCTCTTCAAATCCGCCTTTGACGCCCTGAAATAAAGGTCCATTTCCCATTAACC GCTCCCCCCGCATTCATTCC
Downstream 100 bases:
>100_bases CCCCCGGTCAGCCCCCGTCTGCGCCCTGTGCAGTCGGGGCTTTTTATCCCCCACCTTCAAAAAAGCTCCCCCGCAGGAGC CGTGCTTTCCTGTTGAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTDTALIGSSCALGVFWSSKRYFDYLIDETNLSLLRGKEFGQAVIICPSLREGGTAIRGNTAPFLAQVKTLIDLLHEVKA ERVTYITSIDTQPETGNELSPLLRETEDEWLAALVELKDFINLRFGRVLNVYLPEVTGTGAGMSVADLLAAVPEGTEELD VALLERHQLYPMHRLVRDVEKAWECGIFSVNLVPEPVTAFELVEQCFPSLVNRLPVAKETDPYGSARTSVYSTQYHDPDT GYIMDKQDVLAGLSPDKQS
Sequences:
>Translated_259_residues MTDTALIGSSCALGVFWSSKRYFDYLIDETNLSLLRGKEFGQAVIICPSLREGGTAIRGNTAPFLAQVKTLIDLLHEVKA ERVTYITSIDTQPETGNELSPLLRETEDEWLAALVELKDFINLRFGRVLNVYLPEVTGTGAGMSVADLLAAVPEGTEELD VALLERHQLYPMHRLVRDVEKAWECGIFSVNLVPEPVTAFELVEQCFPSLVNRLPVAKETDPYGSARTSVYSTQYHDPDT GYIMDKQDVLAGLSPDKQS >Mature_258_residues TDTALIGSSCALGVFWSSKRYFDYLIDETNLSLLRGKEFGQAVIICPSLREGGTAIRGNTAPFLAQVKTLIDLLHEVKAE RVTYITSIDTQPETGNELSPLLRETEDEWLAALVELKDFINLRFGRVLNVYLPEVTGTGAGMSVADLLAAVPEGTEELDV ALLERHQLYPMHRLVRDVEKAWECGIFSVNLVPEPVTAFELVEQCFPSLVNRLPVAKETDPYGSARTSVYSTQYHDPDTG YIMDKQDVLAGLSPDKQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28700; Mature: 28569
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTALIGSSCALGVFWSSKRYFDYLIDETNLSLLRGKEFGQAVIICPSLREGGTAIRGN CCCCCEECCCCEEEEEECCCHHHHHHHCCCCHHHHCCCCCCCEEEEECCCCCCCCEECCC TAPFLAQVKTLIDLLHEVKAERVTYITSIDTQPETGNELSPLLRETEDEWLAALVELKDF CCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHH INLRFGRVLNVYLPEVTGTGAGMSVADLLAAVPEGTEELDVALLERHQLYPMHRLVRDVE HHHHHHHEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHH KAWECGIFSVNLVPEPVTAFELVEQCFPSLVNRLPVAKETDPYGSARTSVYSTQYHDPDT HHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCCCC GYIMDKQDVLAGLSPDKQS CEEECHHHHHHCCCCCCCC >Mature Secondary Structure TDTALIGSSCALGVFWSSKRYFDYLIDETNLSLLRGKEFGQAVIICPSLREGGTAIRGN CCCCEECCCCEEEEEECCCHHHHHHHCCCCHHHHCCCCCCCEEEEECCCCCCCCEECCC TAPFLAQVKTLIDLLHEVKAERVTYITSIDTQPETGNELSPLLRETEDEWLAALVELKDF CCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHH INLRFGRVLNVYLPEVTGTGAGMSVADLLAAVPEGTEELDVALLERHQLYPMHRLVRDVE HHHHHHHEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHH KAWECGIFSVNLVPEPVTAFELVEQCFPSLVNRLPVAKETDPYGSARTSVYSTQYHDPDT HHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCCCC GYIMDKQDVLAGLSPDKQS CEEECHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA