| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735026
Identifier: 187735026
GI number: 187735026
Start: 611933
End: 612808
Strand: Reverse
Name: 187735026
Synonym: Amuc_0519
Alternate gene names: NA
Gene position: 612808-611933 (Counterclockwise)
Preceding gene: 187735035
Following gene: 187735022
Centisome position: 23.0
GC content: 60.73
Gene sequence:
>876_bases ATGGAATTGTTCACGGAAGCCGATCATTTGGCGGAAGCCCGGTACAGGAAACTGTTGCGGGAACAGCCCGGCTTTGTGTG GAGGCGGTTTTCAGACGGAGAGGAGCTGATGGCGTATGTCTTTTTTCCCCCCGGCCACCGGGCGGAAGCCGCCGCTCCTT CCGTGCTCTTTTTCCACGGCGGCATGTGGGTGGGCAAGAGCCTGGGGGATTTTGTGCCGTGGGCGCTCCATCTTGCCCAG CAGGGTATTGCAGGCATTATACCCATGTTCCGCACACGCGGCGATTATGAAGTGGAGCCGATGGACATTCTGGAAGAGGG CAGGGAAGCCTGGGCCTGGCTGCATGGGAACGCCGCTCTGCTGGGGCTGGACCCGGCCCGCATTACTGTGGCGGGAAGTG ATGCCGGAGGGCTGATGGCTCTGCATGTGGCCCTTCCGGATCATCCCGCCCGCTGGTCCCTGTTCCGCAAAAAGGCTCCC CTTCCTCCCGGCCCCGCCGCCGTGGCCCTGTTCCGAGGCGTGTGCGACCTGACGGCGCAATCCGCTTTTAAGCTGGGCGG CATGATGCCTCCGGACCAGAGGGATGCCGTCAACCCCCTGCGGCGCGTGCAGAGGGGGCTGCCTCCCCTGTTTGCGAGTC ATGGAGGAAGGGACAGGCTTCTGCCGTGGCGCAACAGCGAGAGGCTGGCGGAGCTGTGGAGAAAAAAGAAGAACCGTTCC CGATTTGAACTTCTGGACGTGGCGGACCACACATTTTACCATTTCAATGTGAATGCCGCCTATTTTGAACAACTGCTCAA TAGCTGGAGCGCGTTTATGGTGGAGCAGGGAATTTGGGAATATAACGAAGGAATGGACACCGGGCTGCTGGGGTGA
Upstream 100 bases:
>100_bases CAGCAGGCCAGGGAGAAAATGGAACGGAAAGTCATTACACGATTATTTAGACATCAAACTTGCGCGGAGTGCAACACAAT TGCATCATGAAGCCGTTCTT
Downstream 100 bases:
>100_bases CCTTGGCCTGATATCCGGGAAGGTTCCCGGAAGGCGTTGCATGCAAAAAGGCTGTTTCCTATCTGCCTCCCAGCATGTTT TCCCGGATTTCCCGCATGTC
Product: Esterase/lipase-like protein
Products: NA
Alternate protein names: Esterase/Lipase-Like Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MELFTEADHLAEARYRKLLREQPGFVWRRFSDGEELMAYVFFPPGHRAEAAAPSVLFFHGGMWVGKSLGDFVPWALHLAQ QGIAGIIPMFRTRGDYEVEPMDILEEGREAWAWLHGNAALLGLDPARITVAGSDAGGLMALHVALPDHPARWSLFRKKAP LPPGPAAVALFRGVCDLTAQSAFKLGGMMPPDQRDAVNPLRRVQRGLPPLFASHGGRDRLLPWRNSERLAELWRKKKNRS RFELLDVADHTFYHFNVNAAYFEQLLNSWSAFMVEQGIWEYNEGMDTGLLG
Sequences:
>Translated_291_residues MELFTEADHLAEARYRKLLREQPGFVWRRFSDGEELMAYVFFPPGHRAEAAAPSVLFFHGGMWVGKSLGDFVPWALHLAQ QGIAGIIPMFRTRGDYEVEPMDILEEGREAWAWLHGNAALLGLDPARITVAGSDAGGLMALHVALPDHPARWSLFRKKAP LPPGPAAVALFRGVCDLTAQSAFKLGGMMPPDQRDAVNPLRRVQRGLPPLFASHGGRDRLLPWRNSERLAELWRKKKNRS RFELLDVADHTFYHFNVNAAYFEQLLNSWSAFMVEQGIWEYNEGMDTGLLG >Mature_291_residues MELFTEADHLAEARYRKLLREQPGFVWRRFSDGEELMAYVFFPPGHRAEAAAPSVLFFHGGMWVGKSLGDFVPWALHLAQ QGIAGIIPMFRTRGDYEVEPMDILEEGREAWAWLHGNAALLGLDPARITVAGSDAGGLMALHVALPDHPARWSLFRKKAP LPPGPAAVALFRGVCDLTAQSAFKLGGMMPPDQRDAVNPLRRVQRGLPPLFASHGGRDRLLPWRNSERLAELWRKKKNRS RFELLDVADHTFYHFNVNAAYFEQLLNSWSAFMVEQGIWEYNEGMDTGLLG
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32777; Mature: 32777
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFTEADHLAEARYRKLLREQPGFVWRRFSDGEELMAYVFFPPGHRAEAAAPSVLFFHG CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEC GMWVGKSLGDFVPWALHLAQQGIAGIIPMFRTRGDYEVEPMDILEEGREAWAWLHGNAAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCEEE LGLDPARITVAGSDAGGLMALHVALPDHPARWSLFRKKAPLPPGPAAVALFRGVCDLTAQ EECCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SAFKLGGMMPPDQRDAVNPLRRVQRGLPPLFASHGGRDRLLPWRNSERLAELWRKKKNRS HHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC RFELLDVADHTFYHFNVNAAYFEQLLNSWSAFMVEQGIWEYNEGMDTGLLG CEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC >Mature Secondary Structure MELFTEADHLAEARYRKLLREQPGFVWRRFSDGEELMAYVFFPPGHRAEAAAPSVLFFHG CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEC GMWVGKSLGDFVPWALHLAQQGIAGIIPMFRTRGDYEVEPMDILEEGREAWAWLHGNAAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCEEE LGLDPARITVAGSDAGGLMALHVALPDHPARWSLFRKKAPLPPGPAAVALFRGVCDLTAQ EECCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SAFKLGGMMPPDQRDAVNPLRRVQRGLPPLFASHGGRDRLLPWRNSERLAELWRKKKNRS HHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC RFELLDVADHTFYHFNVNAAYFEQLLNSWSAFMVEQGIWEYNEGMDTGLLG CEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA