Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735020

Identifier: 187735020

GI number: 187735020

Start: 601745

End: 603946

Strand: Reverse

Name: 187735020

Synonym: Amuc_0513

Alternate gene names: NA

Gene position: 603946-601745 (Counterclockwise)

Preceding gene: 187735021

Following gene: 187735019

Centisome position: 22.67

GC content: 55.63

Gene sequence:

>2202_bases
ATGAAAAAGCATTATTTCTACTCCATACCCTGTTTTGTGCTGACCTGCGCTCTTGCCGCCTGCTCTGACGATCATCAATC
ATCTTCCGCCAAGGCCGGGCAGGATGCAGCCGGCTTGACTCCCGCCGCCTCTCTTGATCCTTTGGCTTCCGTGGCTCCCG
ACCTGGTGGCGAAGCGTGCCGAACGGCTCGGAATAGCCGCTCTCTTTCCCAAGGAAATGGGGATGATGGCGGGTGTTTAC
GATATTCCCGGCATCATGAAGAGCGTTCAGAATTTGAACATGGTGAAAACCTGGAGTTCCTGCTCCTCCGGGGAGGAGGC
CGATGAATCCATAGCCATTCCGGGAGAAGACGCTTCCGAACCCGTGCAGCGGAAATGTTCTTTCAGCAGCCCTGTCATTG
ACGCGATGATCGGCTTGGGTCCCGAATGGGCTCCGTGGCTGGATAGCGCGCAGTCCTCTTTTACCAAGATGGGCCTGAAC
CAGATGAAGGAAATTTTGTCCGTTTACAAGCTTTTCCAGGGGGTAAAGGATGGAAATGAGGATGCCGATGGTGCGGGGGC
GGAGGTCATGGGCGGCCAGGGGGCCGAGATGATTGTGCAGTGGGCTGAGCTGATGGATTTACGCCCTTCCCAGGCTGCGA
CGGCGCCTGTGATGATTGCCGCCAAACTGACGCCGGAAGCCCAGGCCCAGGCCAAAGCTTTCCTGAAGGACGCCAATCTC
CAGGAGGATATGGAGCTGCATGGAATGGTTTCCCTGTATGAAAAGACCTACAATGGCCTGGCCTGCAAGGTAGCGGAAGT
GGACTGCAAAAAAGTGCGTGCGAAGCTGGAAGAAATGCTGGATGAGGCGAAAGACCGGATGGAGATTTCCCGGGAAAATA
TGGACCGTCTTAAGGCGGCGCTCGTTCGTCTGGATGAATCCAGGCTGTATGTGGCCGTCTCTTTTGTGGATGATACCCTG
GTAGGCTTTATAACCACCAATCCTGAAAAACAGGTCCGTATCGCCTCTTCACCCCAGGAATCCATGCTGTCCCGTCCTGA
TTTCTCCATGGCGGATGCACGGTTCCAGTATCCGGCTTATGGGCTGCTGTTCGCAGACAAAGCTTCCGTCAAAGGGGTTA
TTAACATGGATTTGGCCTATTACAAGGGCATGCTCACCGGGTTGAAGGATGTGATGCAGACGATAGGCGCCGATTGGAAA
ATTGCCGATCTGGCTCCTTCCATGACGGCGCTGGATTCCATCAAGGCCAGCATGCTTGGCATGTATGAAAAGCTGGCCCG
GAATGCTACGGCCGTTTCCTACTTCTCGTGGCAGGATCAGGGGGTGCATGTGGAAGCATGCACATATCCGCTGGAATTCT
ACAAGTTGGACGCTCCTTCCGCCATGAGTGCCGTGCGTCCTGGCGCGTCCACGGTGCTGTATTCCTCCTGCACGGTCAAT
CCGCAGATGATGGATATGGGTTGTTCCCTGTGCGGTAATATTGCCCAGATTGTATGGGACTACGGCAATGCCTATATTTC
CAATCCGAAGCATGATGTGAGCGATCAGGTGCGCATGGCCGCCCCTATGATCCAGATGGCCAGGCCTACCATTGAGGAGC
TCTGGAAGGCTTATAAAACTGCTCTTTCCGGCCTTACGGGTTCAGGCGTGTTCATTATGGACATGCAGGGCGCTCCCAGT
CCCATGCTCAAGAATGTGCCGGCGCCGCGTTTCTCCGCTGCATATGAAGTGAAAAACCGCGCCGCCCTGGGAGAAGCCTG
GCAGAAAGTGGCTAATGCCGCCAAAACCGTCGTCACTCTGGCCAGCCAGGGTAAAATGGCGGAGTTGCCCGCTCCCCAGT
CTTCTGTGGACGGGGATATCACTACCTACGATTACCAGTGTCCTTTGGGCGCCGATCTGAACCCGGTGGTAAGCATTTCC
GATACCCGCTGGGCGGTCAGTATGCCGAAGGCCTTCGGTATGGAAGTCCTCAGGGAATCCGTGAAATCTCCGGTACAGGG
AGCCCCTCTCGAATTTCAGCTTAACCTGGTTCCGGTCCGTGACGCCCTGAAGAGCGCGGCGGAAAGCAGCAGGGAGCTTC
GGAATGCTGTGGAAACCCTCGATGTAATCACTTCCGATGTTACGGGAATTCATGCCACGGGGCGCAAGGCCGCGGACGGC
AGAGACGTGTACCACATCCATATTATTTCCGCCGCCAAGTAA

Upstream 100 bases:

>100_bases
GGAAACGCCTGTATAATGGGAAAGATGCGCCGATAGGGGCTGTTGCCGCAAGGAAGCAGCGCGCTTGCCGGATGGCATCA
TGACCCCATGTTTAAAGATA

Downstream 100 bases:

>100_bases
CGGCCCTTCAGTTCTGCCTGCAGGCTTCCGGGATGGATTCCCGGAAGCTTTTTTGTTGATGGAGAAAAGATTTTGTTGAT
GTTGTAACGGGCATCCAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 733; Mature: 733

Protein sequence:

>733_residues
MKKHYFYSIPCFVLTCALAACSDDHQSSSAKAGQDAAGLTPAASLDPLASVAPDLVAKRAERLGIAALFPKEMGMMAGVY
DIPGIMKSVQNLNMVKTWSSCSSGEEADESIAIPGEDASEPVQRKCSFSSPVIDAMIGLGPEWAPWLDSAQSSFTKMGLN
QMKEILSVYKLFQGVKDGNEDADGAGAEVMGGQGAEMIVQWAELMDLRPSQAATAPVMIAAKLTPEAQAQAKAFLKDANL
QEDMELHGMVSLYEKTYNGLACKVAEVDCKKVRAKLEEMLDEAKDRMEISRENMDRLKAALVRLDESRLYVAVSFVDDTL
VGFITTNPEKQVRIASSPQESMLSRPDFSMADARFQYPAYGLLFADKASVKGVINMDLAYYKGMLTGLKDVMQTIGADWK
IADLAPSMTALDSIKASMLGMYEKLARNATAVSYFSWQDQGVHVEACTYPLEFYKLDAPSAMSAVRPGASTVLYSSCTVN
PQMMDMGCSLCGNIAQIVWDYGNAYISNPKHDVSDQVRMAAPMIQMARPTIEELWKAYKTALSGLTGSGVFIMDMQGAPS
PMLKNVPAPRFSAAYEVKNRAALGEAWQKVANAAKTVVTLASQGKMAELPAPQSSVDGDITTYDYQCPLGADLNPVVSIS
DTRWAVSMPKAFGMEVLRESVKSPVQGAPLEFQLNLVPVRDALKSAAESSRELRNAVETLDVITSDVTGIHATGRKAADG
RDVYHIHIISAAK

Sequences:

>Translated_733_residues
MKKHYFYSIPCFVLTCALAACSDDHQSSSAKAGQDAAGLTPAASLDPLASVAPDLVAKRAERLGIAALFPKEMGMMAGVY
DIPGIMKSVQNLNMVKTWSSCSSGEEADESIAIPGEDASEPVQRKCSFSSPVIDAMIGLGPEWAPWLDSAQSSFTKMGLN
QMKEILSVYKLFQGVKDGNEDADGAGAEVMGGQGAEMIVQWAELMDLRPSQAATAPVMIAAKLTPEAQAQAKAFLKDANL
QEDMELHGMVSLYEKTYNGLACKVAEVDCKKVRAKLEEMLDEAKDRMEISRENMDRLKAALVRLDESRLYVAVSFVDDTL
VGFITTNPEKQVRIASSPQESMLSRPDFSMADARFQYPAYGLLFADKASVKGVINMDLAYYKGMLTGLKDVMQTIGADWK
IADLAPSMTALDSIKASMLGMYEKLARNATAVSYFSWQDQGVHVEACTYPLEFYKLDAPSAMSAVRPGASTVLYSSCTVN
PQMMDMGCSLCGNIAQIVWDYGNAYISNPKHDVSDQVRMAAPMIQMARPTIEELWKAYKTALSGLTGSGVFIMDMQGAPS
PMLKNVPAPRFSAAYEVKNRAALGEAWQKVANAAKTVVTLASQGKMAELPAPQSSVDGDITTYDYQCPLGADLNPVVSIS
DTRWAVSMPKAFGMEVLRESVKSPVQGAPLEFQLNLVPVRDALKSAAESSRELRNAVETLDVITSDVTGIHATGRKAADG
RDVYHIHIISAAK
>Mature_733_residues
MKKHYFYSIPCFVLTCALAACSDDHQSSSAKAGQDAAGLTPAASLDPLASVAPDLVAKRAERLGIAALFPKEMGMMAGVY
DIPGIMKSVQNLNMVKTWSSCSSGEEADESIAIPGEDASEPVQRKCSFSSPVIDAMIGLGPEWAPWLDSAQSSFTKMGLN
QMKEILSVYKLFQGVKDGNEDADGAGAEVMGGQGAEMIVQWAELMDLRPSQAATAPVMIAAKLTPEAQAQAKAFLKDANL
QEDMELHGMVSLYEKTYNGLACKVAEVDCKKVRAKLEEMLDEAKDRMEISRENMDRLKAALVRLDESRLYVAVSFVDDTL
VGFITTNPEKQVRIASSPQESMLSRPDFSMADARFQYPAYGLLFADKASVKGVINMDLAYYKGMLTGLKDVMQTIGADWK
IADLAPSMTALDSIKASMLGMYEKLARNATAVSYFSWQDQGVHVEACTYPLEFYKLDAPSAMSAVRPGASTVLYSSCTVN
PQMMDMGCSLCGNIAQIVWDYGNAYISNPKHDVSDQVRMAAPMIQMARPTIEELWKAYKTALSGLTGSGVFIMDMQGAPS
PMLKNVPAPRFSAAYEVKNRAALGEAWQKVANAAKTVVTLASQGKMAELPAPQSSVDGDITTYDYQCPLGADLNPVVSIS
DTRWAVSMPKAFGMEVLRESVKSPVQGAPLEFQLNLVPVRDALKSAAESSRELRNAVETLDVITSDVTGIHATGRKAADG
RDVYHIHIISAAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79271; Mature: 79271

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHYFYSIPCFVLTCALAACSDDHQSSSAKAGQDAAGLTPAASLDPLASVAPDLVAKRA
CCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ERLGIAALFPKEMGMMAGVYDIPGIMKSVQNLNMVKTWSSCSSGEEADESIAIPGEDASE
HHCCCCEECHHHHHHHCCHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCEECCCCCCCC
PVQRKCSFSSPVIDAMIGLGPEWAPWLDSAQSSFTKMGLNQMKEILSVYKLFQGVKDGNE
HHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DADGAGAEVMGGQGAEMIVQWAELMDLRPSQAATAPVMIAAKLTPEAQAQAKAFLKDANL
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC
QEDMELHGMVSLYEKTYNGLACKVAEVDCKKVRAKLEEMLDEAKDRMEISRENMDRLKAA
HHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVRLDESRLYVAVSFVDDTLVGFITTNPEKQVRIASSPQESMLSRPDFSMADARFQYPAY
HHHCCCCCEEEEEEEECCCEEEEEECCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCE
GLLFADKASVKGVINMDLAYYKGMLTGLKDVMQTIGADWKIADLAPSMTALDSIKASMLG
EEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHH
MYEKLARNATAVSYFSWQDQGVHVEACTYPLEFYKLDAPSAMSAVRPGASTVLYSSCTVN
HHHHHHCCCCEEEEEEECCCCEEEEEEECCEEEEEECCCHHHHHHCCCCCEEEEECCCCC
PQMMDMGCSLCGNIAQIVWDYGNAYISNPKHDVSDQVRMAAPMIQMARPTIEELWKAYKT
HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
ALSGLTGSGVFIMDMQGAPSPMLKNVPAPRFSAAYEVKNRAALGEAWQKVANAAKTVVTL
HHCCCCCCCEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASQGKMAELPAPQSSVDGDITTYDYQCPLGADLNPVVSISDTRWAVSMPKAFGMEVLRES
HCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCEEEEECCHHHHHHHHHHH
VKSPVQGAPLEFQLNLVPVRDALKSAAESSRELRNAVETLDVITSDVTGIHATGRKAADG
HCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC
RDVYHIHIISAAK
CCEEEEEEEEECC
>Mature Secondary Structure
MKKHYFYSIPCFVLTCALAACSDDHQSSSAKAGQDAAGLTPAASLDPLASVAPDLVAKRA
CCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ERLGIAALFPKEMGMMAGVYDIPGIMKSVQNLNMVKTWSSCSSGEEADESIAIPGEDASE
HHCCCCEECHHHHHHHCCHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCEECCCCCCCC
PVQRKCSFSSPVIDAMIGLGPEWAPWLDSAQSSFTKMGLNQMKEILSVYKLFQGVKDGNE
HHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DADGAGAEVMGGQGAEMIVQWAELMDLRPSQAATAPVMIAAKLTPEAQAQAKAFLKDANL
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC
QEDMELHGMVSLYEKTYNGLACKVAEVDCKKVRAKLEEMLDEAKDRMEISRENMDRLKAA
HHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVRLDESRLYVAVSFVDDTLVGFITTNPEKQVRIASSPQESMLSRPDFSMADARFQYPAY
HHHCCCCCEEEEEEEECCCEEEEEECCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCE
GLLFADKASVKGVINMDLAYYKGMLTGLKDVMQTIGADWKIADLAPSMTALDSIKASMLG
EEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHH
MYEKLARNATAVSYFSWQDQGVHVEACTYPLEFYKLDAPSAMSAVRPGASTVLYSSCTVN
HHHHHHCCCCEEEEEEECCCCEEEEEEECCEEEEEECCCHHHHHHCCCCCEEEEECCCCC
PQMMDMGCSLCGNIAQIVWDYGNAYISNPKHDVSDQVRMAAPMIQMARPTIEELWKAYKT
HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
ALSGLTGSGVFIMDMQGAPSPMLKNVPAPRFSAAYEVKNRAALGEAWQKVANAAKTVVTL
HHCCCCCCCEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASQGKMAELPAPQSSVDGDITTYDYQCPLGADLNPVVSISDTRWAVSMPKAFGMEVLRES
HCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCEEEEECCHHHHHHHHHHH
VKSPVQGAPLEFQLNLVPVRDALKSAAESSRELRNAVETLDVITSDVTGIHATGRKAADG
HCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC
RDVYHIHIISAAK
CCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA