Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734980

Identifier: 187734980

GI number: 187734980

Start: 561940

End: 562911

Strand: Direct

Name: 187734980

Synonym: Amuc_0473

Alternate gene names: NA

Gene position: 561940-562911 (Clockwise)

Preceding gene: 187734979

Following gene: 187734984

Centisome position: 21.09

GC content: 55.25

Gene sequence:

>972_bases
ATGCTATTTTCACGCGGCCTCATCCGAACTTTCCTGGCTCTTCTGGCATTGGGGGCGATTCCCTTATCTGCAGAAGAACA
GCCGCTTCCTGCTCAAGGCGGTCCCGTCGTGTCCATTACTGACCTGAAGCCCGTAAAGCTGGAGAGGGATGCTCACAGCA
AGCTTCTTGTAGCGCAATGCACTGTCAATGGAGTCCCATGCAATCTTATTGTGGACACGGCGGCTTCCCACACCACATTT
GATATCAAATTCATCAAAAAGAATTTTCCCGGCCTGCCGCTTGAAGACGTTCAAATAGCCCCTGGTTCCAACGTCCATGC
CGTCCCCCGGCTATTTGCCATGCGGTCCTTCTCCATGGGAGGGCTTCATATCAAAAACTTCTTCGGCCTTGCCCTGGATC
TTACTCCCCTGCAAAAGGACATGCAGGTGAAGATAGACGGCATCCTGGGCATCAACTACCTGGGGTTCTCTCCGTTCCTG
CTGTCCGTCAGGAATGCTTCCCTGCAGTTTCTGGAACGCTCCCGCTTCCCCCAACACAGGAAACCGCTGGATGTGGAACG
TGATCCTTCCGGAATTTTTTACATCCGCTGTTCCCGGGGGGGGGGAGATACTTTCCCGCTGGCTCTTGACTCCGGCTCTT
CTCTTTCCATGGCCCCGCTGGAACAGTGGCCCGCAGATCCGAACGGCAATCAGCTCACCACCAAGGCAACCGACATTAAC
GGACACAATGGGGACTGCACTGTCATGAAACTGGGTATCCCCTCCACGCTCCGCATGGGACCGGACTTCCAAATGGACGG
CCTTTCCTTCGCCGTAACGGGAACAGGGGGCCGATACCAGATCGGCGTGGATACTTTCCAGCATTTTGACATCATCATTG
ATGCTCCGCAGGGGGAAGTCTTCGCCCTTCCTCCCCATTCCAGGCCGGAGCCCCAGGGGCAAAAAGCCCCCGATATCAAA
CAGGAATCTTGA

Upstream 100 bases:

>100_bases
TGGAACTGGAACGCCGTCACAAACCCAACCACCGCAGCCATGACTGATTCGCCGTCAAAATTGGCTTGTCAAACTGCAAA
AACACACCTAATGGTGAAGA

Downstream 100 bases:

>100_bases
GCATGATGCAGATCATGCGAATGGTCCGGGCCGTAGCGCCGAAATGGGCCTTCAACGCCACCTGGGCGCGGGAAGACTGG
GCATGAGCCAGCAGGGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MLFSRGLIRTFLALLALGAIPLSAEEQPLPAQGGPVVSITDLKPVKLERDAHSKLLVAQCTVNGVPCNLIVDTAASHTTF
DIKFIKKNFPGLPLEDVQIAPGSNVHAVPRLFAMRSFSMGGLHIKNFFGLALDLTPLQKDMQVKIDGILGINYLGFSPFL
LSVRNASLQFLERSRFPQHRKPLDVERDPSGIFYIRCSRGGGDTFPLALDSGSSLSMAPLEQWPADPNGNQLTTKATDIN
GHNGDCTVMKLGIPSTLRMGPDFQMDGLSFAVTGTGGRYQIGVDTFQHFDIIIDAPQGEVFALPPHSRPEPQGQKAPDIK
QES

Sequences:

>Translated_323_residues
MLFSRGLIRTFLALLALGAIPLSAEEQPLPAQGGPVVSITDLKPVKLERDAHSKLLVAQCTVNGVPCNLIVDTAASHTTF
DIKFIKKNFPGLPLEDVQIAPGSNVHAVPRLFAMRSFSMGGLHIKNFFGLALDLTPLQKDMQVKIDGILGINYLGFSPFL
LSVRNASLQFLERSRFPQHRKPLDVERDPSGIFYIRCSRGGGDTFPLALDSGSSLSMAPLEQWPADPNGNQLTTKATDIN
GHNGDCTVMKLGIPSTLRMGPDFQMDGLSFAVTGTGGRYQIGVDTFQHFDIIIDAPQGEVFALPPHSRPEPQGQKAPDIK
QES
>Mature_323_residues
MLFSRGLIRTFLALLALGAIPLSAEEQPLPAQGGPVVSITDLKPVKLERDAHSKLLVAQCTVNGVPCNLIVDTAASHTTF
DIKFIKKNFPGLPLEDVQIAPGSNVHAVPRLFAMRSFSMGGLHIKNFFGLALDLTPLQKDMQVKIDGILGINYLGFSPFL
LSVRNASLQFLERSRFPQHRKPLDVERDPSGIFYIRCSRGGGDTFPLALDSGSSLSMAPLEQWPADPNGNQLTTKATDIN
GHNGDCTVMKLGIPSTLRMGPDFQMDGLSFAVTGTGGRYQIGVDTFQHFDIIIDAPQGEVFALPPHSRPEPQGQKAPDIK
QES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35042; Mature: 35042

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSRGLIRTFLALLALGAIPLSAEEQPLPAQGGPVVSITDLKPVKLERDAHSKLLVAQC
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCEEEEEEE
TVNGVPCNLIVDTAASHTTFDIKFIKKNFPGLPLEDVQIAPGSNVHAVPRLFAMRSFSMG
ECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCC
GLHIKNFFGLALDLTPLQKDMQVKIDGILGINYLGFSPFLLSVRNASLQFLERSRFPQHR
CEEEEEEEEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEEHHHHHHHHHHHCCCCCC
KPLDVERDPSGIFYIRCSRGGGDTFPLALDSGSSLSMAPLEQWPADPNGNQLTTKATDIN
CCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEECCHHHCCCCCCCCEEEEEEEECC
GHNGDCTVMKLGIPSTLRMGPDFQMDGLSFAVTGTGGRYQIGVDTFQHFDIIIDAPQGEV
CCCCCEEEEEECCCHHCCCCCCCEECCEEEEEECCCCEEEEECCCEEEEEEEEECCCCCE
FALPPHSRPEPQGQKAPDIKQES
EEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLFSRGLIRTFLALLALGAIPLSAEEQPLPAQGGPVVSITDLKPVKLERDAHSKLLVAQC
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCEEEEEEE
TVNGVPCNLIVDTAASHTTFDIKFIKKNFPGLPLEDVQIAPGSNVHAVPRLFAMRSFSMG
ECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCC
GLHIKNFFGLALDLTPLQKDMQVKIDGILGINYLGFSPFLLSVRNASLQFLERSRFPQHR
CEEEEEEEEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEEHHHHHHHHHHHCCCCCC
KPLDVERDPSGIFYIRCSRGGGDTFPLALDSGSSLSMAPLEQWPADPNGNQLTTKATDIN
CCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEECCHHHCCCCCCCCEEEEEEEECC
GHNGDCTVMKLGIPSTLRMGPDFQMDGLSFAVTGTGGRYQIGVDTFQHFDIIIDAPQGEV
CCCCCEEEEEECCCHHCCCCCCCEECCEEEEEECCCCEEEEECCCEEEEEEEEECCCCCE
FALPPHSRPEPQGQKAPDIKQES
EEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA