| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is yhaI [C]
Identifier: 187734957
GI number: 187734957
Start: 535775
End: 536407
Strand: Reverse
Name: yhaI [C]
Synonym: Amuc_0450
Alternate gene names: 187734957
Gene position: 536407-535775 (Counterclockwise)
Preceding gene: 187734958
Following gene: 187734947
Centisome position: 20.13
GC content: 58.93
Gene sequence:
>633_bases ATGAGCGATCTGTACGAGTACCAGGCAATTGACGGTTCTTCCAAAGGCCCGGTTGACCTGGTGCTCTTGTTGCGGGCCCG TAACCTCGGCCGCCTGTCCAACCGGACTTTGGTCCGGAAGGTTCCCGGCGGAGACTGGAGGCCTCTGGCCTCTTTTATCC CCTCCATGACTGTCATGGATGATGATGGGGAGCCCTCCGTTCTGCCGGACCCCGGACCGGAGCCTGGAGGAACCGACTCC GGCTGGAGCAGGAAGAAGTACTGGATGCGCGTCATCAAGGCATGGTGCCGTTTTGAGGGCCGTGCCGGGAAAGGGGAGCT GCACGAGGTTTTTTCCGGAGTGGGGGTTGCGTGGTTGGCCGTGGCGGGAGCCCCCTCTTTTGTAAAATGCGGTTTTTTCC CGTCCCTGGTTCCGTGGGTTGACCTGGTTTCCCCTCTGCTGTACGTGGTGCTTGCCGTGCTGTCTATTCCGCTGGCGGCT ACCATGGTCCGGCGTCTGCATGATGTCGGGAGGAGCGGCTTTTTCCTGGTTTTTCTGGCCGTTCCCTTCATAGGGTGGCT GCTGTTGTGGTATTTATCCCATGGGGAAAGCCGGATTGGAGAGAATAAGTACGGAGATCCCCCTTGGAATTAA
Upstream 100 bases:
>100_bases CCTCCAAACTGGTTTTGAAGTGGGAAGGCCCCGGTTTGTCCAAGCAGGAGATTCCCGCCTCCGCCTTCAGTCACGGGAAG GAATCCAGGTAAGCGTCCCT
Downstream 100 bases:
>100_bases GAGGGGTTGGAATCCGGACCTTGTAAAGTTGCTACAAAGTTTTTGACTGCGTTTGCGGATTTGAGGGAATCATCCGGTTA AAAAGTTTTTGCATGGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSDLYEYQAIDGSSKGPVDLVLLLRARNLGRLSNRTLVRKVPGGDWRPLASFIPSMTVMDDDGEPSVLPDPGPEPGGTDS GWSRKKYWMRVIKAWCRFEGRAGKGELHEVFSGVGVAWLAVAGAPSFVKCGFFPSLVPWVDLVSPLLYVVLAVLSIPLAA TMVRRLHDVGRSGFFLVFLAVPFIGWLLLWYLSHGESRIGENKYGDPPWN
Sequences:
>Translated_210_residues MSDLYEYQAIDGSSKGPVDLVLLLRARNLGRLSNRTLVRKVPGGDWRPLASFIPSMTVMDDDGEPSVLPDPGPEPGGTDS GWSRKKYWMRVIKAWCRFEGRAGKGELHEVFSGVGVAWLAVAGAPSFVKCGFFPSLVPWVDLVSPLLYVVLAVLSIPLAA TMVRRLHDVGRSGFFLVFLAVPFIGWLLLWYLSHGESRIGENKYGDPPWN >Mature_209_residues SDLYEYQAIDGSSKGPVDLVLLLRARNLGRLSNRTLVRKVPGGDWRPLASFIPSMTVMDDDGEPSVLPDPGPEPGGTDSG WSRKKYWMRVIKAWCRFEGRAGKGELHEVFSGVGVAWLAVAGAPSFVKCGFFPSLVPWVDLVSPLLYVVLAVLSIPLAAT MVRRLHDVGRSGFFLVFLAVPFIGWLLLWYLSHGESRIGENKYGDPPWN
Specific function: Unknown
COG id: COG3152
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23203; Mature: 23072
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLYEYQAIDGSSKGPVDLVLLLRARNLGRLSNRTLVRKVPGGDWRPLASFIPSMTVMD CCCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHCCCEEEECCCCCCCHHHHHCCCCEEEC DDGEPSVLPDPGPEPGGTDSGWSRKKYWMRVIKAWCRFEGRAGKGELHEVFSGVGVAWLA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH VAGAPSFVKCGFFPSLVPWVDLVSPLLYVVLAVLSIPLAATMVRRLHDVGRSGFFLVFLA HHCCCCHHECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VPFIGWLLLWYLSHGESRIGENKYGDPPWN HHHHHHHHHHHHHHCHHHCCCCCCCCCCCC >Mature Secondary Structure SDLYEYQAIDGSSKGPVDLVLLLRARNLGRLSNRTLVRKVPGGDWRPLASFIPSMTVMD CCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHCCCEEEECCCCCCCHHHHHCCCCEEEC DDGEPSVLPDPGPEPGGTDSGWSRKKYWMRVIKAWCRFEGRAGKGELHEVFSGVGVAWLA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH VAGAPSFVKCGFFPSLVPWVDLVSPLLYVVLAVLSIPLAATMVRRLHDVGRSGFFLVFLA HHCCCCHHECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VPFIGWLLLWYLSHGESRIGENKYGDPPWN HHHHHHHHHHHHHHCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA