Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734948

Identifier: 187734948

GI number: 187734948

Start: 524048

End: 524971

Strand: Direct

Name: 187734948

Synonym: Amuc_0441

Alternate gene names: NA

Gene position: 524048-524971 (Clockwise)

Preceding gene: 187734939

Following gene: 187734949

Centisome position: 19.67

GC content: 59.96

Gene sequence:

>924_bases
ATGAACATCCGGATTCTGAGCGATGGGAAACAGGGCCACCTCAACCAGTCCCTGGGGCTGGCGCAGGCTCTGATCTCCAA
AGCGGGGGGAACCGTGGAAACGGTAGACCTGCAGGGGCTTTCCCTTTTGGGGAAAATCCGGAAGGTCGTCACAGGCAGCG
ACATTCCACGGCCGGATCTGTTCATTTCCGCCGGACATGCAACGCATATCCCGCTCATCTGCGCGCGGCACCATTTCAAA
ACCCGGGCCGTCCTCTGCATGAAGCCTACGCTTCCCTGCTCCTTTTTCGACCTCTGCCTTATTCCCCGCCATGACCTGGA
TTCCGGCCGCGATTACACGGATACGGATATCTTCCCCACCCAGGGAGCTCTCCACCCCATGAGACCGGATCCCTCCGTAC
CAAAGGATACCACACTGATTCTCATAGGAGGGCCCAGCAAAGATTTTGACTGGGATGACGAAAGCATGCTCAACCAGCTC
GCGTCCATCAGCATCCACACCCCCGGACACCTTGTTCTAACCACCTCGCGCCGGACGCCGGACGGCTTTGCGGAAAAAAT
CCGGACGGCCGTTCCGGAACTAACCGTCGTTCCCGTGGAGGAAACCCGGCCGGGGTGGGTAGCCCGGCATCTGGCGCACG
CCTCCGCCGCCTGGGTCAGCCAGGACAGCGTCTCCATGGTATATGAGGCTCTTGGCTCCGGCGCGCCTGTAGGCATCCTT
TCCGTACCGCGCCGACACGGCAGCCGCAAATCCCGCATCCTGTCCGGCCTGGAGACACTGGAAAAGGAAGGCATGGTTAC
TGGATACAGTGACTGGAAAAAACAGAACTTCCGCCTGACGGCTCCCGGTTCCCCGCTTCTGGAAGCGGACCGTGCAGCAG
ACTACATCCTCTCCAGATTTTTCCCTCAGCTCCGCGCCTTATGA

Upstream 100 bases:

>100_bases
CGGAATCATGAACAAGAGCATGCCTCCCACCAAGAATTTTCTTCTGTCCGGTGGAAATTGGATTGCCTGCACCCCGCCGC
CGCTTCATAATGCCGCATAT

Downstream 100 bases:

>100_bases
AAATAGTACATCTCGTCCCCTCCATGGAATCCGGAGGCGTGGAACAAGTCGTTATGGAACTGGGCAGCGGCCTTTCTTCC
CGGGGCGTGGAAAATATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MNIRILSDGKQGHLNQSLGLAQALISKAGGTVETVDLQGLSLLGKIRKVVTGSDIPRPDLFISAGHATHIPLICARHHFK
TRAVLCMKPTLPCSFFDLCLIPRHDLDSGRDYTDTDIFPTQGALHPMRPDPSVPKDTTLILIGGPSKDFDWDDESMLNQL
ASISIHTPGHLVLTTSRRTPDGFAEKIRTAVPELTVVPVEETRPGWVARHLAHASAAWVSQDSVSMVYEALGSGAPVGIL
SVPRRHGSRKSRILSGLETLEKEGMVTGYSDWKKQNFRLTAPGSPLLEADRAADYILSRFFPQLRAL

Sequences:

>Translated_307_residues
MNIRILSDGKQGHLNQSLGLAQALISKAGGTVETVDLQGLSLLGKIRKVVTGSDIPRPDLFISAGHATHIPLICARHHFK
TRAVLCMKPTLPCSFFDLCLIPRHDLDSGRDYTDTDIFPTQGALHPMRPDPSVPKDTTLILIGGPSKDFDWDDESMLNQL
ASISIHTPGHLVLTTSRRTPDGFAEKIRTAVPELTVVPVEETRPGWVARHLAHASAAWVSQDSVSMVYEALGSGAPVGIL
SVPRRHGSRKSRILSGLETLEKEGMVTGYSDWKKQNFRLTAPGSPLLEADRAADYILSRFFPQLRAL
>Mature_307_residues
MNIRILSDGKQGHLNQSLGLAQALISKAGGTVETVDLQGLSLLGKIRKVVTGSDIPRPDLFISAGHATHIPLICARHHFK
TRAVLCMKPTLPCSFFDLCLIPRHDLDSGRDYTDTDIFPTQGALHPMRPDPSVPKDTTLILIGGPSKDFDWDDESMLNQL
ASISIHTPGHLVLTTSRRTPDGFAEKIRTAVPELTVVPVEETRPGWVARHLAHASAAWVSQDSVSMVYEALGSGAPVGIL
SVPRRHGSRKSRILSGLETLEKEGMVTGYSDWKKQNFRLTAPGSPLLEADRAADYILSRFFPQLRAL

Specific function: Unknown

COG id: COG3660

COG function: function code M; Predicted nucleoside-diphosphate-sugar epimerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33549; Mature: 33549

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRILSDGKQGHLNQSLGLAQALISKAGGTVETVDLQGLSLLGKIRKVVTGSDIPRPDL
CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCE
FISAGHATHIPLICARHHFKTRAVLCMKPTLPCSFFDLCLIPRHDLDSGRDYTDTDIFPT
EEECCCCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
QGALHPMRPDPSVPKDTTLILIGGPSKDFDWDDESMLNQLASISIHTPGHLVLTTSRRTP
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHEEEECCCEEEEEECCCCC
DGFAEKIRTAVPELTVVPVEETRPGWVARHLAHASAAWVSQDSVSMVYEALGSGAPVGIL
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEE
SVPRRHGSRKSRILSGLETLEKEGMVTGYSDWKKQNFRLTAPGSPLLEADRAADYILSRF
ECCCCCCCHHHHHHHHHHHHHHCCCEECCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH
FPQLRAL
HHHHHCC
>Mature Secondary Structure
MNIRILSDGKQGHLNQSLGLAQALISKAGGTVETVDLQGLSLLGKIRKVVTGSDIPRPDL
CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCE
FISAGHATHIPLICARHHFKTRAVLCMKPTLPCSFFDLCLIPRHDLDSGRDYTDTDIFPT
EEECCCCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
QGALHPMRPDPSVPKDTTLILIGGPSKDFDWDDESMLNQLASISIHTPGHLVLTTSRRTP
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHEEEECCCEEEEEECCCCC
DGFAEKIRTAVPELTVVPVEETRPGWVARHLAHASAAWVSQDSVSMVYEALGSGAPVGIL
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEE
SVPRRHGSRKSRILSGLETLEKEGMVTGYSDWKKQNFRLTAPGSPLLEADRAADYILSRF
ECCCCCCCHHHHHHHHHHHHHHCCCEECCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH
FPQLRAL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA