Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734935

Identifier: 187734935

GI number: 187734935

Start: 512364

End: 513191

Strand: Direct

Name: 187734935

Synonym: Amuc_0428

Alternate gene names: NA

Gene position: 512364-513191 (Clockwise)

Preceding gene: 187734934

Following gene: 187734936

Centisome position: 19.23

GC content: 56.16

Gene sequence:

>828_bases
ATGAAAAAAAACTTATTTATTGCTGCAATCCTCTGCGGATCATGCATCTCCGCTAATGCCGCCAGCATGGTCACGGAATG
GACCGGCAATGCCGGCCCTACGGAAGGCAACACCTATGAACTGGGCAATGCAGACAACTGGAGCAACGGTGTACCCGCCC
GCGGCAACAACCAGGGACCGGATGTAATTTTTAATAACACCGGAACCATCACCCTCAGCGGCTCCATGGTGGACACATCC
GATGGCGGCAGCATTACTGTCACAGGCAACAGCAATGTTACGGTGGGGGGAACCCGCTGGACGGGAAATGTCACCATTGG
AGCAGGTTCCGCTCTTTCCCTCTCACAAGTGGACTTTAAAAGCAGTGACATCATCCTGGACGGCACCTTCAACCTTGGCG
TTTGCGGCATTGATGGAGGCGGCAATGGAGCCCGGCTTGTTTTCGGAATAAACGGGATCATGAACGTTAATCAGCAAATC
TGGGGAGCATCCAGCTTCTCCGTTTCCGGGATGCTGGCCACCATATCCACGGATCTGGCTGCTGGAGAATTCCAATTTGT
TACCCGTACGCTGATTACCTCATCCGGCTTCAATGGCGGTTCCATTTCCCTGGGAGACTTCACCGCTGAAGACGGCGGAG
CGCTGACCAAGGCATCCGGCATCATGGAAGGGAACGCCGCGGACTACCAGGGCCAGTACTATCTCTACACGGAAGACGGG
AATGTCAAAGTGCAGTACGTTGTGGCGGGAGCTGTGCCGGAACCTGCTACGGCCACCCTCAGCCTGCTGGGGCTGGCTTC
CCTGATGCTGCGCCGCAGGCGCGCCTGA

Upstream 100 bases:

>100_bases
CTTAGAATCAAATCTTGACCCCGGATTGTTAAACCGGTAGCATCGCGGCAACGTCAGCATTTCTTCTGGCCTTATTGATC
AAATTATTTCTGTTTTTAAT

Downstream 100 bases:

>100_bases
CCTTTTATCCCCGGTCCTTTCCTCGACAGCCTGTATGCCCATGCGTACAGGCTGTTTTGTTTTCCAGGCGAGTGACGAAA
ACGTCACGGAAAACATCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKKNLFIAAILCGSCISANAASMVTEWTGNAGPTEGNTYELGNADNWSNGVPARGNNQGPDVIFNNTGTITLSGSMVDTS
DGGSITVTGNSNVTVGGTRWTGNVTIGAGSALSLSQVDFKSSDIILDGTFNLGVCGIDGGGNGARLVFGINGIMNVNQQI
WGASSFSVSGMLATISTDLAAGEFQFVTRTLITSSGFNGGSISLGDFTAEDGGALTKASGIMEGNAADYQGQYYLYTEDG
NVKVQYVVAGAVPEPATATLSLLGLASLMLRRRRA

Sequences:

>Translated_275_residues
MKKNLFIAAILCGSCISANAASMVTEWTGNAGPTEGNTYELGNADNWSNGVPARGNNQGPDVIFNNTGTITLSGSMVDTS
DGGSITVTGNSNVTVGGTRWTGNVTIGAGSALSLSQVDFKSSDIILDGTFNLGVCGIDGGGNGARLVFGINGIMNVNQQI
WGASSFSVSGMLATISTDLAAGEFQFVTRTLITSSGFNGGSISLGDFTAEDGGALTKASGIMEGNAADYQGQYYLYTEDG
NVKVQYVVAGAVPEPATATLSLLGLASLMLRRRRA
>Mature_275_residues
MKKNLFIAAILCGSCISANAASMVTEWTGNAGPTEGNTYELGNADNWSNGVPARGNNQGPDVIFNNTGTITLSGSMVDTS
DGGSITVTGNSNVTVGGTRWTGNVTIGAGSALSLSQVDFKSSDIILDGTFNLGVCGIDGGGNGARLVFGINGIMNVNQQI
WGASSFSVSGMLATISTDLAAGEFQFVTRTLITSSGFNGGSISLGDFTAEDGGALTKASGIMEGNAADYQGQYYLYTEDG
NVKVQYVVAGAVPEPATATLSLLGLASLMLRRRRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28102; Mature: 28102

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLFIAAILCGSCISANAASMVTEWTGNAGPTEGNTYELGNADNWSNGVPARGNNQGP
CCCCEEEEEEECCCCCCCCCHHEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
DVIFNNTGTITLSGSMVDTSDGGSITVTGNSNVTVGGTRWTGNVTIGAGSALSLSQVDFK
CEEECCCCEEEEECCEEECCCCCEEEEECCCEEEECCEEEECEEEEECCCCEEEEEECCC
SSDIILDGTFNLGVCGIDGGGNGARLVFGINGIMNVNQQIWGASSFSVSGMLATISTDLA
CCCEEEECCCCEEEEEECCCCCCEEEEEEECCEEECCHHHCCCCCCEECEEEEEEECCCC
AGEFQFVTRTLITSSGFNGGSISLGDFTAEDGGALTKASGIMEGNAADYQGQYYLYTEDG
CCHHHHEEEEEHHCCCCCCCEEEECCEECCCCCCEEEECCEECCCCCCCCCEEEEEECCC
NVKVQYVVAGAVPEPATATLSLLGLASLMLRRRRA
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKNLFIAAILCGSCISANAASMVTEWTGNAGPTEGNTYELGNADNWSNGVPARGNNQGP
CCCCEEEEEEECCCCCCCCCHHEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
DVIFNNTGTITLSGSMVDTSDGGSITVTGNSNVTVGGTRWTGNVTIGAGSALSLSQVDFK
CEEECCCCEEEEECCEEECCCCCEEEEECCCEEEECCEEEECEEEEECCCCEEEEEECCC
SSDIILDGTFNLGVCGIDGGGNGARLVFGINGIMNVNQQIWGASSFSVSGMLATISTDLA
CCCEEEECCCCEEEEEECCCCCCEEEEEEECCEEECCHHHCCCCCCEECEEEEEEECCCC
AGEFQFVTRTLITSSGFNGGSISLGDFTAEDGGALTKASGIMEGNAADYQGQYYLYTEDG
CCHHHHEEEEEHHCCCCCCCEEEECCEECCCCCCEEEECCEECCCCCCCCCEEEEEECCC
NVKVQYVVAGAVPEPATATLSLLGLASLMLRRRRA
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA