| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734886
Identifier: 187734886
GI number: 187734886
Start: 451920
End: 452612
Strand: Reverse
Name: 187734886
Synonym: Amuc_0378
Alternate gene names: NA
Gene position: 452612-451920 (Counterclockwise)
Preceding gene: 187734887
Following gene: 187734885
Centisome position: 16.99
GC content: 51.66
Gene sequence:
>693_bases ATGATGGGGTCCTCTCTCTGTTGGGCGGATTCTTCCGGAGTAGCGGATGATCCTTCCCTTCGCACCTGGACTAATAAAAA TACGGGCAGTACGGTGGAAGCCCGTCCAGTAGCCCTGAATATGAAGACCGTCAAATTGGTGACGACGGCTAAAAAGCCCA TTACGATGCCGCTGGAAAAGCTTTCCGATGAAGATCGCGCATGGCTGGAGGAACACAAGGAAGTTATCGGCAAGCCTATT GCAGAATGGTCGTCCATGCCGTCCGGCCCTGTGGCGGAGGAGATGAAGGGAAAGACTTACATGCTTGAAAACGGCAAACT TAAAAAGAGGGACGGGAAATTGAATCCCAAGCATTTCATTTTGTATTTCAGTGCAAGCTGGTGCGGTCCTTGCTGCCGGA ATGCGCCTCACAGCGTGGAGGCCTATAACAGGGTGGTAAAGGATAATCCGGATGTGGAAGTAATCATGTGCAATCTGGAC CAGAACCTGGATGCCGCCCAAAAATGGGCTGCTGCCAATAACATGCCATGGCCTATCCTGTTGAAAGAGGATTTGACGGA GCTTGCCAAGAAGGTGGCTCCACGCGGTATCCCTACCATGATTCTGGTGGACAAGGACGGCAAGCCTATTCAGTCCTCCC AAAACATGGAACAGTTGGTAAAAGCCATCGGCTCAAGCCGTTCTTCCCGCTAG
Upstream 100 bases:
>100_bases ATTTTGGAATCAGCTTCTCGACATGGAAGATAAGAAATAGTATATTAGCATTATGTGTATGAAATTTTCATCTTGGTGTA TCTTATTGGCATCCACATTC
Downstream 100 bases:
>100_bases GCGGCGCATTGTCTGATTGTTGAGGAGATGTCTTCTACCCGCAAATCCCAGTCCGACCGTTCTGCGGAAACCAGCGGCAA AATCCTCCGTGCTGCACAGA
Product: Redoxin domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MMGSSLCWADSSGVADDPSLRTWTNKNTGSTVEARPVALNMKTVKLVTTAKKPITMPLEKLSDEDRAWLEEHKEVIGKPI AEWSSMPSGPVAEEMKGKTYMLENGKLKKRDGKLNPKHFILYFSASWCGPCCRNAPHSVEAYNRVVKDNPDVEVIMCNLD QNLDAAQKWAAANNMPWPILLKEDLTELAKKVAPRGIPTMILVDKDGKPIQSSQNMEQLVKAIGSSRSSR
Sequences:
>Translated_230_residues MMGSSLCWADSSGVADDPSLRTWTNKNTGSTVEARPVALNMKTVKLVTTAKKPITMPLEKLSDEDRAWLEEHKEVIGKPI AEWSSMPSGPVAEEMKGKTYMLENGKLKKRDGKLNPKHFILYFSASWCGPCCRNAPHSVEAYNRVVKDNPDVEVIMCNLD QNLDAAQKWAAANNMPWPILLKEDLTELAKKVAPRGIPTMILVDKDGKPIQSSQNMEQLVKAIGSSRSSR >Mature_230_residues MMGSSLCWADSSGVADDPSLRTWTNKNTGSTVEARPVALNMKTVKLVTTAKKPITMPLEKLSDEDRAWLEEHKEVIGKPI AEWSSMPSGPVAEEMKGKTYMLENGKLKKRDGKLNPKHFILYFSASWCGPCCRNAPHSVEAYNRVVKDNPDVEVIMCNLD QNLDAAQKWAAANNMPWPILLKEDLTELAKKVAPRGIPTMILVDKDGKPIQSSQNMEQLVKAIGSSRSSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25511; Mature: 25511
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGSSLCWADSSGVADDPSLRTWTNKNTGSTVEARPVALNMKTVKLVTTAKKPITMPLEK CCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCEEEECCEEEEEEEECCCCCCCCHHH LSDEDRAWLEEHKEVIGKPIAEWSSMPSGPVAEEMKGKTYMLENGKLKKRDGKLNPKHFI CCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHCCCEEEEECCEEECCCCCCCCCEEE LYFSASWCGPCCRNAPHSVEAYNRVVKDNPDVEVIMCNLDQNLDAAQKWAAANNMPWPIL EEEECCCCCHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEE LKEDLTELAKKVAPRGIPTMILVDKDGKPIQSSQNMEQLVKAIGSSRSSR EHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MMGSSLCWADSSGVADDPSLRTWTNKNTGSTVEARPVALNMKTVKLVTTAKKPITMPLEK CCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCEEEECCEEEEEEEECCCCCCCCHHH LSDEDRAWLEEHKEVIGKPIAEWSSMPSGPVAEEMKGKTYMLENGKLKKRDGKLNPKHFI CCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHCCCEEEEECCEEECCCCCCCCCEEE LYFSASWCGPCCRNAPHSVEAYNRVVKDNPDVEVIMCNLDQNLDAAQKWAAANNMPWPIL EEEECCCCCHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCEEE LKEDLTELAKKVAPRGIPTMILVDKDGKPIQSSQNMEQLVKAIGSSRSSR EHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA