| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734872
Identifier: 187734872
GI number: 187734872
Start: 429432
End: 431012
Strand: Direct
Name: 187734872
Synonym: Amuc_0364
Alternate gene names: NA
Gene position: 429432-431012 (Clockwise)
Preceding gene: 187734871
Following gene: 187734877
Centisome position: 16.12
GC content: 59.46
Gene sequence:
>1581_bases ATGAAAGCGCACCGCCGCAGAATACCCCGCCTCACCTGGTTCAAGCTCGCAGTCTGCATCTGCCTGGCAGCCATGGCAGC CTCCCTGTTCACGCCGTACCCCGCCCAGATCATACGCGCCCTGAAAGGGGCGCCGGAACAGGCACCGCCGGATTCCGGAA CCTGTCCGCCCCAGAAATCCCCCCCCGCGGAACAACCCGGGCAGGAAGAACAGCCAATAACCGCTGCACCATCCGCCTCC GGAAAGGAACCCGGGGATGAACGGCTGTACACTCCATGGACGCCGGAGCGCACAATCGCCCTCCCCCCGGTGCAGTACCC CCCATTTCCCCCCGTGCTTCCCACAAGGCCTGCGGAAGGGGCCATGACCCATATTTATGAACTGGCCCGCGGACTGAACC TGAAAACGCAGGTTAATTTCCAGCCCGGCACCCTGGCCTCCAGGGACAGGGAAACCAAAAGCAATTACCAGATGACCCTT TCCCTGAACGTCAAACAGCCCAAAGCATTGACGAAAAAGGAAGATATGCTGAAGCTCAATCCGAAACTGGAACCCATGCT TCCCGGCCTGTCCACCCTGTTCAGGCATGCGCGCGTCTCCCCTTACTACGGGCAGATTTACGTCCGCAAACAGACGGAAA TCCGTAAAAACCTGGCCTCCCTGCTCAAACTTCTGGACCGCCATAATTATTACGATACGGAGACGATTCTGGAAACCACC TATCCGGACACGGGAAGGAAGCTTCTCTGGCTGCAAAGTGAAATGGATGTTGTTTCCGACGGCTCGGACGGGGACCGGCT GGCCGCCATGCCGGATAAAATCCTGAAAAGCTCCTTCTATCAGCCCAGCACTTCCTACCGCTGGAAAAAGCGCACAGACA AGCCCAATCCCCTGCTCAAACCCTGGCAGCAGAGGCTGGCTTCCTACAAGAAGACGCTGGAAAAAGCCCCCGCCGCGGAA AAAACGGCTCTGCGCCGCAAAATAGACCATGCGGAACGGGTCATTGAGGAACTGAAGCGGTACAGCTTCCTGATCTCAGA ATACGATCCGTTCATCGTGGTTCCGCTGGGAGTCGTCAACCAGTCCACTCCCTTCTCCCCGCAGTTCGGGGACTATGCCG TCGTCATCGTGGGAGACAAGTTGTACCCGGCCCTGGTGGGAGACGCCGGGCCGCGCTACAAAACCGGGGAGGGTTCCCTG CGCCTGAGCCGTGAAATCAACCCCAAGGCGGGCCCTTACAGCCGCCCCGTCTCCGACCTGAAGGTAAGTTACCTGATTTT CCCCGGTTCCGCAGAGCCCGAGGCCGGGCCTCTCGACTATGAAAAAATTACGGACAGATGCCGGGAACTTCTCAACGAAA TAGGCGGCGTGGGGAAAGGATTCAACCTCCACCAGTGGGAAGACCTGCTGGCGCCCAAGCCACCGCCCGCCCCAAAACCG GAAAGCGGCGGCACAGCGGAAACACCTGCAGATAAGCGGAAAAAGGAGGAAGCTCCCGGAAACAAGCCTGCCCCTGCCCC GGCTCCGCCGGCTTCCCCGCAAACTGCTCCGGCTTCATCAGCCGCAAAAAGCGCCGCATAA
Upstream 100 bases:
>100_bases TACTGCTGGCCGCCGCCCCTCTGGGGCTGATACGCCTTTTCATGGGCAGGCGCCCCCGGAAAGTCCTGCCGGCATCCAAT GATTCTCCTTCTTCAGCATC
Downstream 100 bases:
>100_bases GCTACAGAGCCTCTTTCCAAGAAAAAAGAAAGGCTTTCCACATCCGTAAATAAACGTCTCCGCGCGCAATCTTCACCTTC CCGGAAGACGGATGCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MKAHRRRIPRLTWFKLAVCICLAAMAASLFTPYPAQIIRALKGAPEQAPPDSGTCPPQKSPPAEQPGQEEQPITAAPSAS GKEPGDERLYTPWTPERTIALPPVQYPPFPPVLPTRPAEGAMTHIYELARGLNLKTQVNFQPGTLASRDRETKSNYQMTL SLNVKQPKALTKKEDMLKLNPKLEPMLPGLSTLFRHARVSPYYGQIYVRKQTEIRKNLASLLKLLDRHNYYDTETILETT YPDTGRKLLWLQSEMDVVSDGSDGDRLAAMPDKILKSSFYQPSTSYRWKKRTDKPNPLLKPWQQRLASYKKTLEKAPAAE KTALRRKIDHAERVIEELKRYSFLISEYDPFIVVPLGVVNQSTPFSPQFGDYAVVIVGDKLYPALVGDAGPRYKTGEGSL RLSREINPKAGPYSRPVSDLKVSYLIFPGSAEPEAGPLDYEKITDRCRELLNEIGGVGKGFNLHQWEDLLAPKPPPAPKP ESGGTAETPADKRKKEEAPGNKPAPAPAPPASPQTAPASSAAKSAA
Sequences:
>Translated_526_residues MKAHRRRIPRLTWFKLAVCICLAAMAASLFTPYPAQIIRALKGAPEQAPPDSGTCPPQKSPPAEQPGQEEQPITAAPSAS GKEPGDERLYTPWTPERTIALPPVQYPPFPPVLPTRPAEGAMTHIYELARGLNLKTQVNFQPGTLASRDRETKSNYQMTL SLNVKQPKALTKKEDMLKLNPKLEPMLPGLSTLFRHARVSPYYGQIYVRKQTEIRKNLASLLKLLDRHNYYDTETILETT YPDTGRKLLWLQSEMDVVSDGSDGDRLAAMPDKILKSSFYQPSTSYRWKKRTDKPNPLLKPWQQRLASYKKTLEKAPAAE KTALRRKIDHAERVIEELKRYSFLISEYDPFIVVPLGVVNQSTPFSPQFGDYAVVIVGDKLYPALVGDAGPRYKTGEGSL RLSREINPKAGPYSRPVSDLKVSYLIFPGSAEPEAGPLDYEKITDRCRELLNEIGGVGKGFNLHQWEDLLAPKPPPAPKP ESGGTAETPADKRKKEEAPGNKPAPAPAPPASPQTAPASSAAKSAA >Mature_526_residues MKAHRRRIPRLTWFKLAVCICLAAMAASLFTPYPAQIIRALKGAPEQAPPDSGTCPPQKSPPAEQPGQEEQPITAAPSAS GKEPGDERLYTPWTPERTIALPPVQYPPFPPVLPTRPAEGAMTHIYELARGLNLKTQVNFQPGTLASRDRETKSNYQMTL SLNVKQPKALTKKEDMLKLNPKLEPMLPGLSTLFRHARVSPYYGQIYVRKQTEIRKNLASLLKLLDRHNYYDTETILETT YPDTGRKLLWLQSEMDVVSDGSDGDRLAAMPDKILKSSFYQPSTSYRWKKRTDKPNPLLKPWQQRLASYKKTLEKAPAAE KTALRRKIDHAERVIEELKRYSFLISEYDPFIVVPLGVVNQSTPFSPQFGDYAVVIVGDKLYPALVGDAGPRYKTGEGSL RLSREINPKAGPYSRPVSDLKVSYLIFPGSAEPEAGPLDYEKITDRCRELLNEIGGVGKGFNLHQWEDLLAPKPPPAPKP ESGGTAETPADKRKKEEAPGNKPAPAPAPPASPQTAPASSAAKSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58245; Mature: 58245
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAHRRRIPRLTWFKLAVCICLAAMAASLFTPYPAQIIRALKGAPEQAPPDSGTCPPQKS CCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC PPAEQPGQEEQPITAAPSASGKEPGDERLYTPWTPERTIALPPVQYPPFPPVLPTRPAEG CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCH AMTHIYELARGLNLKTQVNFQPGTLASRDRETKSNYQMTLSLNVKQPKALTKKEDMLKLN HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHCHHHHEEEC PKLEPMLPGLSTLFRHARVSPYYGQIYVRKQTEIRKNLASLLKLLDRHNYYDTETILETT CCCCHHCCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC YPDTGRKLLWLQSEMDVVSDGSDGDRLAAMPDKILKSSFYQPSTSYRWKKRTDKPNPLLK CCCCCCEEEEEECCCHHHCCCCCCCEEHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHH PWQQRLASYKKTLEKAPAAEKTALRRKIDHAERVIEELKRYSFLISEYDPFIVVPLGVVN HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC QSTPFSPQFGDYAVVIVGDKLYPALVGDAGPRYKTGEGSLRLSREINPKAGPYSRPVSDL CCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCEECCCCCEEEECCCCCCCCCCCCCHHHC KVSYLIFPGSAEPEAGPLDYEKITDRCRELLNEIGGVGKGFNLHQWEDLLAPKPPPAPKP EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC ESGGTAETPADKRKKEEAPGNKPAPAPAPPASPQTAPASSAAKSAA CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure MKAHRRRIPRLTWFKLAVCICLAAMAASLFTPYPAQIIRALKGAPEQAPPDSGTCPPQKS CCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC PPAEQPGQEEQPITAAPSASGKEPGDERLYTPWTPERTIALPPVQYPPFPPVLPTRPAEG CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCH AMTHIYELARGLNLKTQVNFQPGTLASRDRETKSNYQMTLSLNVKQPKALTKKEDMLKLN HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHCHHHHEEEC PKLEPMLPGLSTLFRHARVSPYYGQIYVRKQTEIRKNLASLLKLLDRHNYYDTETILETT CCCCHHCCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC YPDTGRKLLWLQSEMDVVSDGSDGDRLAAMPDKILKSSFYQPSTSYRWKKRTDKPNPLLK CCCCCCEEEEEECCCHHHCCCCCCCEEHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHH PWQQRLASYKKTLEKAPAAEKTALRRKIDHAERVIEELKRYSFLISEYDPFIVVPLGVVN HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC QSTPFSPQFGDYAVVIVGDKLYPALVGDAGPRYKTGEGSLRLSREINPKAGPYSRPVSDL CCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCEECCCCCEEEECCCCCCCCCCCCCHHHC KVSYLIFPGSAEPEAGPLDYEKITDRCRELLNEIGGVGKGFNLHQWEDLLAPKPPPAPKP EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC ESGGTAETPADKRKKEEAPGNKPAPAPAPPASPQTAPASSAAKSAA CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA