Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187734872

Identifier: 187734872

GI number: 187734872

Start: 429432

End: 431012

Strand: Direct

Name: 187734872

Synonym: Amuc_0364

Alternate gene names: NA

Gene position: 429432-431012 (Clockwise)

Preceding gene: 187734871

Following gene: 187734877

Centisome position: 16.12

GC content: 59.46

Gene sequence:

>1581_bases
ATGAAAGCGCACCGCCGCAGAATACCCCGCCTCACCTGGTTCAAGCTCGCAGTCTGCATCTGCCTGGCAGCCATGGCAGC
CTCCCTGTTCACGCCGTACCCCGCCCAGATCATACGCGCCCTGAAAGGGGCGCCGGAACAGGCACCGCCGGATTCCGGAA
CCTGTCCGCCCCAGAAATCCCCCCCCGCGGAACAACCCGGGCAGGAAGAACAGCCAATAACCGCTGCACCATCCGCCTCC
GGAAAGGAACCCGGGGATGAACGGCTGTACACTCCATGGACGCCGGAGCGCACAATCGCCCTCCCCCCGGTGCAGTACCC
CCCATTTCCCCCCGTGCTTCCCACAAGGCCTGCGGAAGGGGCCATGACCCATATTTATGAACTGGCCCGCGGACTGAACC
TGAAAACGCAGGTTAATTTCCAGCCCGGCACCCTGGCCTCCAGGGACAGGGAAACCAAAAGCAATTACCAGATGACCCTT
TCCCTGAACGTCAAACAGCCCAAAGCATTGACGAAAAAGGAAGATATGCTGAAGCTCAATCCGAAACTGGAACCCATGCT
TCCCGGCCTGTCCACCCTGTTCAGGCATGCGCGCGTCTCCCCTTACTACGGGCAGATTTACGTCCGCAAACAGACGGAAA
TCCGTAAAAACCTGGCCTCCCTGCTCAAACTTCTGGACCGCCATAATTATTACGATACGGAGACGATTCTGGAAACCACC
TATCCGGACACGGGAAGGAAGCTTCTCTGGCTGCAAAGTGAAATGGATGTTGTTTCCGACGGCTCGGACGGGGACCGGCT
GGCCGCCATGCCGGATAAAATCCTGAAAAGCTCCTTCTATCAGCCCAGCACTTCCTACCGCTGGAAAAAGCGCACAGACA
AGCCCAATCCCCTGCTCAAACCCTGGCAGCAGAGGCTGGCTTCCTACAAGAAGACGCTGGAAAAAGCCCCCGCCGCGGAA
AAAACGGCTCTGCGCCGCAAAATAGACCATGCGGAACGGGTCATTGAGGAACTGAAGCGGTACAGCTTCCTGATCTCAGA
ATACGATCCGTTCATCGTGGTTCCGCTGGGAGTCGTCAACCAGTCCACTCCCTTCTCCCCGCAGTTCGGGGACTATGCCG
TCGTCATCGTGGGAGACAAGTTGTACCCGGCCCTGGTGGGAGACGCCGGGCCGCGCTACAAAACCGGGGAGGGTTCCCTG
CGCCTGAGCCGTGAAATCAACCCCAAGGCGGGCCCTTACAGCCGCCCCGTCTCCGACCTGAAGGTAAGTTACCTGATTTT
CCCCGGTTCCGCAGAGCCCGAGGCCGGGCCTCTCGACTATGAAAAAATTACGGACAGATGCCGGGAACTTCTCAACGAAA
TAGGCGGCGTGGGGAAAGGATTCAACCTCCACCAGTGGGAAGACCTGCTGGCGCCCAAGCCACCGCCCGCCCCAAAACCG
GAAAGCGGCGGCACAGCGGAAACACCTGCAGATAAGCGGAAAAAGGAGGAAGCTCCCGGAAACAAGCCTGCCCCTGCCCC
GGCTCCGCCGGCTTCCCCGCAAACTGCTCCGGCTTCATCAGCCGCAAAAAGCGCCGCATAA

Upstream 100 bases:

>100_bases
TACTGCTGGCCGCCGCCCCTCTGGGGCTGATACGCCTTTTCATGGGCAGGCGCCCCCGGAAAGTCCTGCCGGCATCCAAT
GATTCTCCTTCTTCAGCATC

Downstream 100 bases:

>100_bases
GCTACAGAGCCTCTTTCCAAGAAAAAAGAAAGGCTTTCCACATCCGTAAATAAACGTCTCCGCGCGCAATCTTCACCTTC
CCGGAAGACGGATGCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MKAHRRRIPRLTWFKLAVCICLAAMAASLFTPYPAQIIRALKGAPEQAPPDSGTCPPQKSPPAEQPGQEEQPITAAPSAS
GKEPGDERLYTPWTPERTIALPPVQYPPFPPVLPTRPAEGAMTHIYELARGLNLKTQVNFQPGTLASRDRETKSNYQMTL
SLNVKQPKALTKKEDMLKLNPKLEPMLPGLSTLFRHARVSPYYGQIYVRKQTEIRKNLASLLKLLDRHNYYDTETILETT
YPDTGRKLLWLQSEMDVVSDGSDGDRLAAMPDKILKSSFYQPSTSYRWKKRTDKPNPLLKPWQQRLASYKKTLEKAPAAE
KTALRRKIDHAERVIEELKRYSFLISEYDPFIVVPLGVVNQSTPFSPQFGDYAVVIVGDKLYPALVGDAGPRYKTGEGSL
RLSREINPKAGPYSRPVSDLKVSYLIFPGSAEPEAGPLDYEKITDRCRELLNEIGGVGKGFNLHQWEDLLAPKPPPAPKP
ESGGTAETPADKRKKEEAPGNKPAPAPAPPASPQTAPASSAAKSAA

Sequences:

>Translated_526_residues
MKAHRRRIPRLTWFKLAVCICLAAMAASLFTPYPAQIIRALKGAPEQAPPDSGTCPPQKSPPAEQPGQEEQPITAAPSAS
GKEPGDERLYTPWTPERTIALPPVQYPPFPPVLPTRPAEGAMTHIYELARGLNLKTQVNFQPGTLASRDRETKSNYQMTL
SLNVKQPKALTKKEDMLKLNPKLEPMLPGLSTLFRHARVSPYYGQIYVRKQTEIRKNLASLLKLLDRHNYYDTETILETT
YPDTGRKLLWLQSEMDVVSDGSDGDRLAAMPDKILKSSFYQPSTSYRWKKRTDKPNPLLKPWQQRLASYKKTLEKAPAAE
KTALRRKIDHAERVIEELKRYSFLISEYDPFIVVPLGVVNQSTPFSPQFGDYAVVIVGDKLYPALVGDAGPRYKTGEGSL
RLSREINPKAGPYSRPVSDLKVSYLIFPGSAEPEAGPLDYEKITDRCRELLNEIGGVGKGFNLHQWEDLLAPKPPPAPKP
ESGGTAETPADKRKKEEAPGNKPAPAPAPPASPQTAPASSAAKSAA
>Mature_526_residues
MKAHRRRIPRLTWFKLAVCICLAAMAASLFTPYPAQIIRALKGAPEQAPPDSGTCPPQKSPPAEQPGQEEQPITAAPSAS
GKEPGDERLYTPWTPERTIALPPVQYPPFPPVLPTRPAEGAMTHIYELARGLNLKTQVNFQPGTLASRDRETKSNYQMTL
SLNVKQPKALTKKEDMLKLNPKLEPMLPGLSTLFRHARVSPYYGQIYVRKQTEIRKNLASLLKLLDRHNYYDTETILETT
YPDTGRKLLWLQSEMDVVSDGSDGDRLAAMPDKILKSSFYQPSTSYRWKKRTDKPNPLLKPWQQRLASYKKTLEKAPAAE
KTALRRKIDHAERVIEELKRYSFLISEYDPFIVVPLGVVNQSTPFSPQFGDYAVVIVGDKLYPALVGDAGPRYKTGEGSL
RLSREINPKAGPYSRPVSDLKVSYLIFPGSAEPEAGPLDYEKITDRCRELLNEIGGVGKGFNLHQWEDLLAPKPPPAPKP
ESGGTAETPADKRKKEEAPGNKPAPAPAPPASPQTAPASSAAKSAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58245; Mature: 58245

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAHRRRIPRLTWFKLAVCICLAAMAASLFTPYPAQIIRALKGAPEQAPPDSGTCPPQKS
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PPAEQPGQEEQPITAAPSASGKEPGDERLYTPWTPERTIALPPVQYPPFPPVLPTRPAEG
CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCH
AMTHIYELARGLNLKTQVNFQPGTLASRDRETKSNYQMTLSLNVKQPKALTKKEDMLKLN
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHCHHHHEEEC
PKLEPMLPGLSTLFRHARVSPYYGQIYVRKQTEIRKNLASLLKLLDRHNYYDTETILETT
CCCCHHCCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
YPDTGRKLLWLQSEMDVVSDGSDGDRLAAMPDKILKSSFYQPSTSYRWKKRTDKPNPLLK
CCCCCCEEEEEECCCHHHCCCCCCCEEHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHH
PWQQRLASYKKTLEKAPAAEKTALRRKIDHAERVIEELKRYSFLISEYDPFIVVPLGVVN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
QSTPFSPQFGDYAVVIVGDKLYPALVGDAGPRYKTGEGSLRLSREINPKAGPYSRPVSDL
CCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCEECCCCCEEEECCCCCCCCCCCCCHHHC
KVSYLIFPGSAEPEAGPLDYEKITDRCRELLNEIGGVGKGFNLHQWEDLLAPKPPPAPKP
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC
ESGGTAETPADKRKKEEAPGNKPAPAPAPPASPQTAPASSAAKSAA
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MKAHRRRIPRLTWFKLAVCICLAAMAASLFTPYPAQIIRALKGAPEQAPPDSGTCPPQKS
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PPAEQPGQEEQPITAAPSASGKEPGDERLYTPWTPERTIALPPVQYPPFPPVLPTRPAEG
CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCH
AMTHIYELARGLNLKTQVNFQPGTLASRDRETKSNYQMTLSLNVKQPKALTKKEDMLKLN
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHCHHHHEEEC
PKLEPMLPGLSTLFRHARVSPYYGQIYVRKQTEIRKNLASLLKLLDRHNYYDTETILETT
CCCCHHCCCHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
YPDTGRKLLWLQSEMDVVSDGSDGDRLAAMPDKILKSSFYQPSTSYRWKKRTDKPNPLLK
CCCCCCEEEEEECCCHHHCCCCCCCEEHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHH
PWQQRLASYKKTLEKAPAAEKTALRRKIDHAERVIEELKRYSFLISEYDPFIVVPLGVVN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
QSTPFSPQFGDYAVVIVGDKLYPALVGDAGPRYKTGEGSLRLSREINPKAGPYSRPVSDL
CCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCEECCCCCEEEECCCCCCCCCCCCCHHHC
KVSYLIFPGSAEPEAGPLDYEKITDRCRELLNEIGGVGKGFNLHQWEDLLAPKPPPAPKP
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC
ESGGTAETPADKRKKEEAPGNKPAPAPAPPASPQTAPASSAAKSAA
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA