Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is surA [C]

Identifier: 187734800

GI number: 187734800

Start: 345991

End: 347145

Strand: Direct

Name: surA [C]

Synonym: Amuc_0289

Alternate gene names: 187734800

Gene position: 345991-347145 (Clockwise)

Preceding gene: 187734795

Following gene: 187734801

Centisome position: 12.99

GC content: 54.81

Gene sequence:

>1155_bases
ATGCCGGAGGCATTAAAAATACTCTTCTCTCCCCCCATGAATATCAGGACCCACATCCAGGCGCTTCTCATCTGTACCAT
GCCCCTGTCCGCACAGGGGCAAAGCATCGTGGATTCACGGGCCTCCCTTCCACGAGCCGTCCAGCTTCACGGGGATGAAG
GCAGGGAAACGGTGCGGCCAGACGAATCCAAGCGCATCTCTCCGAAAGAAGCGCCGGCATCCCGTGTTCAGCCCCAGCGG
ATCGTCAACCGGATTGCCGCCACAGTCAACGGCCGTCCCATCACGGCCAATGAGGTCAGCGTGCGTCTCATGCCCATCGG
AGCACAGCTCGCGGCCCAGTATCCCAAACAGGGGCCCGAATTCTACAAGCAACTGGCCCTGGCGAAAAAAAACATCATTG
AAGACCTGGTGGAGCGAGAACTGCTCCGCAATGAATTTGAAGGCATGGGCGGCGTCATTAGGGACTCTCTCATTGACCAG
GAAGTCAACCGCACCATCCTGACCACCTTTAACGGAGATCGTTCCGCCTTCCTGAAAAACCTGAGCCTCTCCGGCATGAC
CATCCGCGCTTTCCGGGAAATGACGAAAAAACAGCTTCAGGTTCAAATCATGCGGGCTTCCAAATACGACCAGGAAATAC
CGCCTACTCCGGAGGAAATACAGCAGGAATACGAATCTACCAAAGAACAATACCGGGACCTGACCAAAGACAAAATCAAA
TTCAAGAAAATCTTCATTCCCATGCTGGGGGATGACTCCGCCTCCACGCCGGAAGTACAGCTGAACCTGGCGGAACTCAT
CGCCAAGGAAATCAAATCCAAAAACGCCACCTTTGAGGAAATGGCCAAACGCTACTCCAAGGATCTATATGCGGAAAAAG
GCGGTGACTGGCCCGTTACGGAACGCTCCACGCTCTCCCCGGAATCCGCCGCCATCATCTTTGGCGCACAGCCCGGCGAA
ATCATCGGACCGTTGGTGGACTCCACCGGCTTCACCATCGTATTGGTGGAGAAAAAGGAACTGGCGCCGCCGCCCCCCCT
CTCCGCCATCAAGGAGCAGATTGACATCATGGCGCGCAACAAGCGCAGCAATGAACGTTATAAAAAATGGGTGGAACGCC
TCCGGAAAAAAGCCATCGTCAAAATATACATCTGA

Upstream 100 bases:

>100_bases
TCCACAGTCAGCAAAAGTGCAGGAACCGGCATCCCGCCCATGCCGGGCAGCATCCATACATACCCAGAAATAGATTGTCT
TTGCAGGGCTGTCCCCTATC

Downstream 100 bases:

>100_bases
TTCTTCTCCTTTCCCCATTGCCGGACCGGCCCATTCAACAAGGCCGGTCCGGCGTTCTCTCTTTCATTTCCCCTGTTTTT
CTTTCCGCCAACCGTTCCGT

Product: PpiC-type peptidyl-prolyl cis-trans isomerase

Products: Isomerized Proline [C]

Alternate protein names: PPIC-Type PPIASE Domain Protein; Parvulin-Like Peptidyl-Prolyl Isomerase

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MPEALKILFSPPMNIRTHIQALLICTMPLSAQGQSIVDSRASLPRAVQLHGDEGRETVRPDESKRISPKEAPASRVQPQR
IVNRIAATVNGRPITANEVSVRLMPIGAQLAAQYPKQGPEFYKQLALAKKNIIEDLVERELLRNEFEGMGGVIRDSLIDQ
EVNRTILTTFNGDRSAFLKNLSLSGMTIRAFREMTKKQLQVQIMRASKYDQEIPPTPEEIQQEYESTKEQYRDLTKDKIK
FKKIFIPMLGDDSASTPEVQLNLAELIAKEIKSKNATFEEMAKRYSKDLYAEKGGDWPVTERSTLSPESAAIIFGAQPGE
IIGPLVDSTGFTIVLVEKKELAPPPPLSAIKEQIDIMARNKRSNERYKKWVERLRKKAIVKIYI

Sequences:

>Translated_384_residues
MPEALKILFSPPMNIRTHIQALLICTMPLSAQGQSIVDSRASLPRAVQLHGDEGRETVRPDESKRISPKEAPASRVQPQR
IVNRIAATVNGRPITANEVSVRLMPIGAQLAAQYPKQGPEFYKQLALAKKNIIEDLVERELLRNEFEGMGGVIRDSLIDQ
EVNRTILTTFNGDRSAFLKNLSLSGMTIRAFREMTKKQLQVQIMRASKYDQEIPPTPEEIQQEYESTKEQYRDLTKDKIK
FKKIFIPMLGDDSASTPEVQLNLAELIAKEIKSKNATFEEMAKRYSKDLYAEKGGDWPVTERSTLSPESAAIIFGAQPGE
IIGPLVDSTGFTIVLVEKKELAPPPPLSAIKEQIDIMARNKRSNERYKKWVERLRKKAIVKIYI
>Mature_383_residues
PEALKILFSPPMNIRTHIQALLICTMPLSAQGQSIVDSRASLPRAVQLHGDEGRETVRPDESKRISPKEAPASRVQPQRI
VNRIAATVNGRPITANEVSVRLMPIGAQLAAQYPKQGPEFYKQLALAKKNIIEDLVERELLRNEFEGMGGVIRDSLIDQE
VNRTILTTFNGDRSAFLKNLSLSGMTIRAFREMTKKQLQVQIMRASKYDQEIPPTPEEIQQEYESTKEQYRDLTKDKIKF
KKIFIPMLGDDSASTPEVQLNLAELIAKEIKSKNATFEEMAKRYSKDLYAEKGGDWPVTERSTLSPESAAIIFGAQPGEI
IGPLVDSTGFTIVLVEKKELAPPPPLSAIKEQIDIMARNKRSNERYKKWVERLRKKAIVKIYI

Specific function: Assist In The Folding Of Extracytoplasmic Proteins. Essential For The Survival Of E.Coli In Stationary Phase. [C]

COG id: COG0760

COG function: function code O; Parvulin-like peptidyl-prolyl isomerase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.2.1.8 [C]

Molecular weight: Translated: 43342; Mature: 43211

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50198 PPIC_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEALKILFSPPMNIRTHIQALLICTMPLSAQGQSIVDSRASLPRAVQLHGDEGRETVRP
CCCHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCC
DESKRISPKEAPASRVQPQRIVNRIAATVNGRPITANEVSVRLMPIGAQLAAQYPKQGPE
CCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCEECCCEEEEEEECCHHHHHHCCCCCHH
FYKQLALAKKNIIEDLVERELLRNEFEGMGGVIRDSLIDQEVNRTILTTFNGDRSAFLKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHH
LSLSGMTIRAFREMTKKQLQVQIMRASKYDQEIPPTPEEIQQEYESTKEQYRDLTKDKIK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FKKIFIPMLGDDSASTPEVQLNLAELIAKEIKSKNATFEEMAKRYSKDLYAEKGGDWPVT
HHHEEEEEECCCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
ERSTLSPESAAIIFGAQPGEIIGPLVDSTGFTIVLVEKKELAPPPPLSAIKEQIDIMARN
CCCCCCCCCCEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC
KRSNERYKKWVERLRKKAIVKIYI
CCCHHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure 
PEALKILFSPPMNIRTHIQALLICTMPLSAQGQSIVDSRASLPRAVQLHGDEGRETVRP
CCHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCC
DESKRISPKEAPASRVQPQRIVNRIAATVNGRPITANEVSVRLMPIGAQLAAQYPKQGPE
CCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCEECCCEEEEEEECCHHHHHHCCCCCHH
FYKQLALAKKNIIEDLVERELLRNEFEGMGGVIRDSLIDQEVNRTILTTFNGDRSAFLKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHH
LSLSGMTIRAFREMTKKQLQVQIMRASKYDQEIPPTPEEIQQEYESTKEQYRDLTKDKIK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FKKIFIPMLGDDSASTPEVQLNLAELIAKEIKSKNATFEEMAKRYSKDLYAEKGGDWPVT
HHHEEEEEECCCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
ERSTLSPESAAIIFGAQPGEIIGPLVDSTGFTIVLVEKKELAPPPPLSAIKEQIDIMARN
CCCCCCCCCCEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHC
KRSNERYKKWVERLRKKAIVKIYI
CCCHHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proline Imidic Peptide Bonds In Oligopeptides [C]

Specific reaction: Cis-Trans Isomerization Of Proline Imidic Peptide Bonds In Oligopeptides. [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA