| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is yqfF [H]
Identifier: 187734776
GI number: 187734776
Start: 327190
End: 328950
Strand: Reverse
Name: yqfF [H]
Synonym: Amuc_0264
Alternate gene names: 187734776
Gene position: 328950-327190 (Counterclockwise)
Preceding gene: 187734777
Following gene: 187734775
Centisome position: 12.35
GC content: 52.7
Gene sequence:
>1761_bases ATGTTTCATTTTCTGAAAAAGCATGCCGCCGCAGCGGCAAAAGAAAGTGCCTCCCCGGAAGGGGCTGCCTCCGTGTCCCG TTCAGCCGGTGACCGTTTGGATTCCAGCCTGGCGGTATCCGTCGGGTTGTGCGTGCTGGTTTTCATCGTGCTTCAATGGA TGGGCAGTTACAGTCCCCACTGGGGAAAATCCATATGGCATCATGTGTCGGAAGCTTTTCTGCTTTTTTCCGTGACGCTG GCGCTGATGCCTATGTACTGGTTATGCGCCGGTTCCCTGCGCAGGAAAAACAAAACCTTTGTCGTCACGTGGGGGGCGGT TCTGGTCCAGCTCCTGTTTTTTGGTCTCATCCGGCATGTAACGGCTGACATTACTTCCGATATAGGCAATGAACTTTTGT ACCTTCCCTATATGATGGCTCCGTTGGTTGTCACGGTGCTGCTGGGACCTCTTTTGGGCATGTTTGCCACTATTTCCATC TGCATGCTTGGCGGATTTTTCATTCTGCCGGAGCAATATGCTCCGGAAAAGCAGGTCCAATTCTGGATTCTGAGCTCTCT CTCCGGCATGCTTACCGTGTTGCTTACCCATAACCTGCGGAATCGTGCTCAGTTGCTGCGAGCGGGCTTCTTTGTGGGGC TGCTTGTCATGGTGCTGTGTTGCATCATGGGTGTCATCAATCTCCAGGCATGGGACTACAACCTTACTGGAGTTCTGGTT TGCCTGGCCGTGGCTTTTGGCGTAAGCATGCTGACCAGCGTGCTGATCAGCGGTGTCCTGCCTATCATAGAAGGAGCTTT TAAAATCATTACGCCCATTTCCTGGCTGGAAATGGCGGATATGAACCGCCCTCTCATGAAAAGGCTGCAAATGGAAGCTC CGGGAACCTTTCACCATTGCCTGATGGTTGCCCAGCTGGCGGAAGCTGCGGCGGAAGCCATTGGGGCCAATCCCATTGAA TGCCGGGTGGAGGCCTACTACCATGACATTGGCAAGATGCAAAACCCCCTTTATTTCATTGAAAATATCATGGACGGCCC CAATCCCCATGATGAGCTGACGCCCAGCATGAGCGCCCGTATCATCATCGACCACGTTCAGGACGGGGTGGCATTGGCCA GGGAGAACAACCTTCCGCGTCCTTTGGTGGACGTTATAGAGCAGCATCACGGCACGTCACTGGCTTACTTCTTTTACCGG AAAGCCCTCCAATACCGTGATGAGATTCTGAGCCGCGTGGAAAGCGGCCTGGCGTCTCCGGATGACGTCCCGGAGGTGGT GGAATCCAACTTCCGTTACAAGGGGCCCAACCCGCAGAGCAAGGAAACGGGAATCGTCAGCCTGGCGGACATCGTGGAAA GCGCCACGCGCTCCATGGGTAAAATTTCCTGTGAGGAAATGCAGAAAAGGGTGGATGAACTTTTGAAGCAACGGGTGGTG GACGGCCATTTGGACGATTGCGGCCTTACCTTCGGAGATCTCAAAAAGATTCGCAACAGTTTCATTAAGACGCTGAAAAG CATCCACCACAACCGCATTGCCTATCCTTCTCACAATCCGGAGGCAAAAATTGAGAAAAATGCTTTCTCTGATGTGTCCG TCAGGGAAAAAGAAGAGAAAGCGGTGAAAAAGGAAGGTGAAGGAAAAGCCGTTCCTGAAATCATGGAGTTGCCCGATGCC GGAACCCTTCAAGAGGGAAAATCCACGGAAACGGAGATGAAGAACGGAGCGGATGCGGAGGAAAATGAAACCGAATCTTG A
Upstream 100 bases:
>100_bases TGGAAATGGTGCAGCAGGGCGTCAACCCCCTCATAGAAGAGGAGATGGCCCGGCTGGGCACTATTCCGGAGGTTGCCGAA GTGTACCCCAAATAATTATC
Downstream 100 bases:
>100_bases ACTCTACAATCATTTGGGGGAGGGGAGGCTCAGTTCATCCGTTACGGATGCCCTGATTGGAGCCTTGGAGAGTTGTCTTC CGTCCGTGTTGGCGTTGCCT
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MFHFLKKHAAAAAKESASPEGAASVSRSAGDRLDSSLAVSVGLCVLVFIVLQWMGSYSPHWGKSIWHHVSEAFLLFSVTL ALMPMYWLCAGSLRRKNKTFVVTWGAVLVQLLFFGLIRHVTADITSDIGNELLYLPYMMAPLVVTVLLGPLLGMFATISI CMLGGFFILPEQYAPEKQVQFWILSSLSGMLTVLLTHNLRNRAQLLRAGFFVGLLVMVLCCIMGVINLQAWDYNLTGVLV CLAVAFGVSMLTSVLISGVLPIIEGAFKIITPISWLEMADMNRPLMKRLQMEAPGTFHHCLMVAQLAEAAAEAIGANPIE CRVEAYYHDIGKMQNPLYFIENIMDGPNPHDELTPSMSARIIIDHVQDGVALARENNLPRPLVDVIEQHHGTSLAYFFYR KALQYRDEILSRVESGLASPDDVPEVVESNFRYKGPNPQSKETGIVSLADIVESATRSMGKISCEEMQKRVDELLKQRVV DGHLDDCGLTFGDLKKIRNSFIKTLKSIHHNRIAYPSHNPEAKIEKNAFSDVSVREKEEKAVKKEGEGKAVPEIMELPDA GTLQEGKSTETEMKNGADAEENETES
Sequences:
>Translated_586_residues MFHFLKKHAAAAAKESASPEGAASVSRSAGDRLDSSLAVSVGLCVLVFIVLQWMGSYSPHWGKSIWHHVSEAFLLFSVTL ALMPMYWLCAGSLRRKNKTFVVTWGAVLVQLLFFGLIRHVTADITSDIGNELLYLPYMMAPLVVTVLLGPLLGMFATISI CMLGGFFILPEQYAPEKQVQFWILSSLSGMLTVLLTHNLRNRAQLLRAGFFVGLLVMVLCCIMGVINLQAWDYNLTGVLV CLAVAFGVSMLTSVLISGVLPIIEGAFKIITPISWLEMADMNRPLMKRLQMEAPGTFHHCLMVAQLAEAAAEAIGANPIE CRVEAYYHDIGKMQNPLYFIENIMDGPNPHDELTPSMSARIIIDHVQDGVALARENNLPRPLVDVIEQHHGTSLAYFFYR KALQYRDEILSRVESGLASPDDVPEVVESNFRYKGPNPQSKETGIVSLADIVESATRSMGKISCEEMQKRVDELLKQRVV DGHLDDCGLTFGDLKKIRNSFIKTLKSIHHNRIAYPSHNPEAKIEKNAFSDVSVREKEEKAVKKEGEGKAVPEIMELPDA GTLQEGKSTETEMKNGADAEENETES >Mature_586_residues MFHFLKKHAAAAAKESASPEGAASVSRSAGDRLDSSLAVSVGLCVLVFIVLQWMGSYSPHWGKSIWHHVSEAFLLFSVTL ALMPMYWLCAGSLRRKNKTFVVTWGAVLVQLLFFGLIRHVTADITSDIGNELLYLPYMMAPLVVTVLLGPLLGMFATISI CMLGGFFILPEQYAPEKQVQFWILSSLSGMLTVLLTHNLRNRAQLLRAGFFVGLLVMVLCCIMGVINLQAWDYNLTGVLV CLAVAFGVSMLTSVLISGVLPIIEGAFKIITPISWLEMADMNRPLMKRLQMEAPGTFHHCLMVAQLAEAAAEAIGANPIE CRVEAYYHDIGKMQNPLYFIENIMDGPNPHDELTPSMSARIIIDHVQDGVALARENNLPRPLVDVIEQHHGTSLAYFFYR KALQYRDEILSRVESGLASPDDVPEVVESNFRYKGPNPQSKETGIVSLADIVESATRSMGKISCEEMQKRVDELLKQRVV DGHLDDCGLTFGDLKKIRNSFIKTLKSIHHNRIAYPSHNPEAKIEKNAFSDVSVREKEEKAVKKEGEGKAVPEIMELPDA GTLQEGKSTETEMKNGADAEENETES
Specific function: Unknown
COG id: COG1480
COG function: function code R; Predicted membrane-associated HD superfamily hydrolase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011624 - InterPro: IPR011621 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]
EC number: NA
Molecular weight: Translated: 64897; Mature: 64897
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHFLKKHAAAAAKESASPEGAASVSRSAGDRLDSSLAVSVGLCVLVFIVLQWMGSYSPH CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WGKSIWHHVSEAFLLFSVTLALMPMYWLCAGSLRRKNKTFVVTWGAVLVQLLFFGLIRHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHH TADITSDIGNELLYLPYMMAPLVVTVLLGPLLGMFATISICMLGGFFILPEQYAPEKQVQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHH FWILSSLSGMLTVLLTHNLRNRAQLLRAGFFVGLLVMVLCCIMGVINLQAWDYNLTGVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH CLAVAFGVSMLTSVLISGVLPIIEGAFKIITPISWLEMADMNRPLMKRLQMEAPGTFHHC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHH LMVAQLAEAAAEAIGANPIECRVEAYYHDIGKMQNPLYFIENIMDGPNPHDELTPSMSAR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHCCCCCCHH IIIDHVQDGVALARENNLPRPLVDVIEQHHGTSLAYFFYRKALQYRDEILSRVESGLASP HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDVPEVVESNFRYKGPNPQSKETGIVSLADIVESATRSMGKISCEEMQKRVDELLKQRVV CCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH DGHLDDCGLTFGDLKKIRNSFIKTLKSIHHNRIAYPSHNPEAKIEKNAFSDVSVREKEEK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AVKKEGEGKAVPEIMELPDAGTLQEGKSTETEMKNGADAEENETES HHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure MFHFLKKHAAAAAKESASPEGAASVSRSAGDRLDSSLAVSVGLCVLVFIVLQWMGSYSPH CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WGKSIWHHVSEAFLLFSVTLALMPMYWLCAGSLRRKNKTFVVTWGAVLVQLLFFGLIRHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHH TADITSDIGNELLYLPYMMAPLVVTVLLGPLLGMFATISICMLGGFFILPEQYAPEKQVQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHH FWILSSLSGMLTVLLTHNLRNRAQLLRAGFFVGLLVMVLCCIMGVINLQAWDYNLTGVLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH CLAVAFGVSMLTSVLISGVLPIIEGAFKIITPISWLEMADMNRPLMKRLQMEAPGTFHHC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHH LMVAQLAEAAAEAIGANPIECRVEAYYHDIGKMQNPLYFIENIMDGPNPHDELTPSMSAR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHCCCCCCHH IIIDHVQDGVALARENNLPRPLVDVIEQHHGTSLAYFFYRKALQYRDEILSRVESGLASP HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDVPEVVESNFRYKGPNPQSKETGIVSLADIVESATRSMGKISCEEMQKRVDELLKQRVV CCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH DGHLDDCGLTFGDLKKIRNSFIKTLKSIHHNRIAYPSHNPEAKIEKNAFSDVSVREKEEK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH AVKKEGEGKAVPEIMELPDAGTLQEGKSTETEMKNGADAEENETES HHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]