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The map label for this gene is ybeQ [H]

Identifier: 187734753

GI number: 187734753

Start: 298195

End: 299637

Strand: Reverse

Name: ybeQ [H]

Synonym: Amuc_0241

Alternate gene names: 187734753

Gene position: 299637-298195 (Counterclockwise)

Preceding gene: 187734754

Following gene: 187734752

Centisome position: 11.25

GC content: 55.72

Gene sequence:

>1443_bases
ATGACTTGTTCCGGTATGAAGAAACATTGCAGATGGTGGCTTTTTGCCGGATTGTGGGGACTGTCCCTCGTTCAGCATCC
ACTTCTTGCTTCTCAGAATATTTCCTCTCCGGAGCCTGCCGGGGAGGGAAATTTTGAGGCTTACTTGTCCGGTCTCCGCG
AAAGAGCTCTGAATGGGGATCCAGCTGCCGCCCGGGAGCTGTCTGTGCATTATGACGTGGAGGGTAATGCTGCGGAAACG
TCCAAATGGATGTCCGAGTATGTTTCCTTGGCAGAGAAAAGGGCCAATAACGGAGATGTGGATTCCATGCTGGATTTGGG
CAAGCTGTTTTATACAGGCAGCCGCCTGTACCCAAAGAACCTGGAAAGGGCCCGGTACTGGTTTACCCGGGCTGCTGACA
GCGGTAATGCCGCGGCACAGTACCAGGTGGCTGTAATGGCTTCCCAGGGAGCAGGAGGACCGAAGGATGAAGCAACGGCA
GCCCTTTATTATAAAAAATCTCTCCAGACGTGGAAGAAAGAGGCGGATGACGGTGATTCCAAGGCGGCGTTATGGGCTGC
CCTTGTTTATGAACGAAAGCTGGTTCCGGACAGTTCTCCGGAAAAGTCAGTCCCATATCTTCTTCAGGCAGCGGAAAGCG
GCAACCTGACAGCACAAGGCCTTCTGGCATTTAAGTACCGGGATGGGCTGGGAGTGCCGCAGGATGCGGCCAAGGCCGTA
GAATGGTTTGAGAAAGCGGCCTCCCGTAAAGATTTGGGAGCCGTGATGGAACTGGGCATAATGTTCCGGGACGGCAAGTA
TTTGCCCCCTGACCGGGAAAAGGCCTTCCATTGGTTTGAAAAAGGGGCGGAATGGAAGGATCCGTACAGCATGGCTGCCC
TGGCGGATATGCTGCTGGAGGGAACTCCTTCCGCAGAACAGGCGGCCCGGGCCCTGGCTCTGTATCGTGAGGCTGCCGCC
GCCGGTTATTTCCCTGCGGCACTAAAGGCCGCGGAGCTGCTCCAGAACGGGAAGGGCGGGGAACTGGATGCGGATGAGGC
CTACAGGCTGCTGCGGCGTGTGGCGGATGCTACAGGGGATCCCAAGGCCATGTACATGCTGGCCCAGGTATATTATACAC
GGGGTGATGAGGCTCAGGGAGATTCCCTGATGAAAGCATCCGCCCAGGCTGCCTATTTGCCGGCCATGAACCGCATGGCG
CGTCTCCATCTTCTGCCGGACAGTTCACTGCCCTGGAATCCGGTTTTATCCTATTATTATTGGAACCAGGCTGGAGAAAT
GGGGGATGAAAAGGCGGCTTCCGCCGCTTTTTGGCTGTTGTGGGGCGGCTCAGGCATCTTTTTGCTGGCAATATTTATTA
TTGTCTGGCGTTTTCAGCGTTTTGCCGCCAGAAGGCTTGCGGAACAGCAGAAACAGGAACGGGAGGCCTCTGATGACGCA
TGA

Upstream 100 bases:

>100_bases
CGGAGGAGGTTTTCAGAGGCGTGAAGGCGGGTTTCGTAAGCCGGGCTTTGGAGGCAGGTCCTCCAGCAGTTTTTCCCGCG
GAAACAGGGGCCATTAATGA

Downstream 100 bases:

>100_bases
AGCGTATTATGAGGTATCCGGCATGAAAAAAATCTGTTAAAAATACTGTAGTACTCCATGATGAACATGTTAGCTATTTT
TGGACTGGGAACACCGGAGA

Product: Sel1 domain protein repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MTCSGMKKHCRWWLFAGLWGLSLVQHPLLASQNISSPEPAGEGNFEAYLSGLRERALNGDPAAARELSVHYDVEGNAAET
SKWMSEYVSLAEKRANNGDVDSMLDLGKLFYTGSRLYPKNLERARYWFTRAADSGNAAAQYQVAVMASQGAGGPKDEATA
ALYYKKSLQTWKKEADDGDSKAALWAALVYERKLVPDSSPEKSVPYLLQAAESGNLTAQGLLAFKYRDGLGVPQDAAKAV
EWFEKAASRKDLGAVMELGIMFRDGKYLPPDREKAFHWFEKGAEWKDPYSMAALADMLLEGTPSAEQAARALALYREAAA
AGYFPAALKAAELLQNGKGGELDADEAYRLLRRVADATGDPKAMYMLAQVYYTRGDEAQGDSLMKASAQAAYLPAMNRMA
RLHLLPDSSLPWNPVLSYYYWNQAGEMGDEKAASAAFWLLWGGSGIFLLAIFIIVWRFQRFAARRLAEQQKQEREASDDA

Sequences:

>Translated_480_residues
MTCSGMKKHCRWWLFAGLWGLSLVQHPLLASQNISSPEPAGEGNFEAYLSGLRERALNGDPAAARELSVHYDVEGNAAET
SKWMSEYVSLAEKRANNGDVDSMLDLGKLFYTGSRLYPKNLERARYWFTRAADSGNAAAQYQVAVMASQGAGGPKDEATA
ALYYKKSLQTWKKEADDGDSKAALWAALVYERKLVPDSSPEKSVPYLLQAAESGNLTAQGLLAFKYRDGLGVPQDAAKAV
EWFEKAASRKDLGAVMELGIMFRDGKYLPPDREKAFHWFEKGAEWKDPYSMAALADMLLEGTPSAEQAARALALYREAAA
AGYFPAALKAAELLQNGKGGELDADEAYRLLRRVADATGDPKAMYMLAQVYYTRGDEAQGDSLMKASAQAAYLPAMNRMA
RLHLLPDSSLPWNPVLSYYYWNQAGEMGDEKAASAAFWLLWGGSGIFLLAIFIIVWRFQRFAARRLAEQQKQEREASDDA
>Mature_479_residues
TCSGMKKHCRWWLFAGLWGLSLVQHPLLASQNISSPEPAGEGNFEAYLSGLRERALNGDPAAARELSVHYDVEGNAAETS
KWMSEYVSLAEKRANNGDVDSMLDLGKLFYTGSRLYPKNLERARYWFTRAADSGNAAAQYQVAVMASQGAGGPKDEATAA
LYYKKSLQTWKKEADDGDSKAALWAALVYERKLVPDSSPEKSVPYLLQAAESGNLTAQGLLAFKYRDGLGVPQDAAKAVE
WFEKAASRKDLGAVMELGIMFRDGKYLPPDREKAFHWFEKGAEWKDPYSMAALADMLLEGTPSAEQAARALALYREAAAA
GYFPAALKAAELLQNGKGGELDADEAYRLLRRVADATGDPKAMYMLAQVYYTRGDEAQGDSLMKASAQAAYLPAMNRMAR
LHLLPDSSLPWNPVLSYYYWNQAGEMGDEKAASAAFWLLWGGSGIFLLAIFIIVWRFQRFAARRLAEQQKQEREASDDA

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=323, Percent_Identity=26.3157894736842, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI87081769, Length=203, Percent_Identity=33.0049261083744, Blast_Score=92, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17563256, Length=327, Percent_Identity=26.2996941896024, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21355295, Length=305, Percent_Identity=27.5409836065574, Blast_Score=70, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 52998; Mature: 52867

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCSGMKKHCRWWLFAGLWGLSLVQHPLLASQNISSPEPAGEGNFEAYLSGLRERALNGD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PAAARELSVHYDVEGNAAETSKWMSEYVSLAEKRANNGDVDSMLDLGKLFYTGSRLYPKN
CCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCH
LERARYWFTRAADSGNAAAQYQVAVMASQGAGGPKDEATAALYYKKSLQTWKKEADDGDS
HHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
KAALWAALVYERKLVPDSSPEKSVPYLLQAAESGNLTAQGLLAFKYRDGLGVPQDAAKAV
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEHHEEEEEECCCCCCCHHHHHHH
EWFEKAASRKDLGAVMELGIMFRDGKYLPPDREKAFHWFEKGAEWKDPYSMAALADMLLE
HHHHHHHCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
GTPSAEQAARALALYREAAAAGYFPAALKAAELLQNGKGGELDADEAYRLLRRVADATGD
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
PKAMYMLAQVYYTRGDEAQGDSLMKASAQAAYLPAMNRMARLHLLPDSSLPWNPVLSYYY
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHH
WNQAGEMGDEKAASAAFWLLWGGSGIFLLAIFIIVWRFQRFAARRLAEQQKQEREASDDA
HCCCCCCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TCSGMKKHCRWWLFAGLWGLSLVQHPLLASQNISSPEPAGEGNFEAYLSGLRERALNGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PAAARELSVHYDVEGNAAETSKWMSEYVSLAEKRANNGDVDSMLDLGKLFYTGSRLYPKN
CCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCH
LERARYWFTRAADSGNAAAQYQVAVMASQGAGGPKDEATAALYYKKSLQTWKKEADDGDS
HHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
KAALWAALVYERKLVPDSSPEKSVPYLLQAAESGNLTAQGLLAFKYRDGLGVPQDAAKAV
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEHHEEEEEECCCCCCCHHHHHHH
EWFEKAASRKDLGAVMELGIMFRDGKYLPPDREKAFHWFEKGAEWKDPYSMAALADMLLE
HHHHHHHCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
GTPSAEQAARALALYREAAAAGYFPAALKAAELLQNGKGGELDADEAYRLLRRVADATGD
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
PKAMYMLAQVYYTRGDEAQGDSLMKASAQAAYLPAMNRMARLHLLPDSSLPWNPVLSYYY
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHH
WNQAGEMGDEKAASAAFWLLWGGSGIFLLAIFIIVWRFQRFAARRLAEQQKQEREASDDA
HCCCCCCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]