| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734751
Identifier: 187734751
GI number: 187734751
Start: 297333
End: 297611
Strand: Reverse
Name: 187734751
Synonym: Amuc_0239
Alternate gene names: NA
Gene position: 297611-297333 (Counterclockwise)
Preceding gene: 187734752
Following gene: 187734750
Centisome position: 11.17
GC content: 44.44
Gene sequence:
>279_bases ATGGAGCATGTGCCTTGCGAAGGGGAAGTTTTTGACGGATGCATTTTTACGGAAACCGCAACCCGGGCGGGAAAGAAGTG CAATTTCATGTTCACAGGAATACTGTACAGAAGGAGGAATGGCGCAGTTTATTGGCTTTTCTCTTTTTATGGCCTGGAAA AAAGAAAAGGCGTGGATTTTGCGGCTGATGTTTCCCGTCTTTCAAAGGGTATATTGAATGAAAGGCTTCAGGTATTGATT TCTTGCGTTGCCCGCTGGCTTGTTGTACACATGTATTAA
Upstream 100 bases:
>100_bases CAATCAGAACGGAATGTTTTCAGAATAACCTGCAGGTTTTATTTTTGGCAGTGATACCGGAGGGCTCTCCTGGATGCGGG TATTCCGGCGTGCATCCGTG
Downstream 100 bases:
>100_bases TGAAAATTCATTTTTGCGGCGCAGCGGGAACGACGACGGGCTCCCAGCATTTGCTGGAGGTGAACGGGTGCCGGATTCTT CTGGATTGCGGCATGTATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MEHVPCEGEVFDGCIFTETATRAGKKCNFMFTGILYRRRNGAVYWLFSFYGLEKRKGVDFAADVSRLSKGILNERLQVLI SCVARWLVVHMY
Sequences:
>Translated_92_residues MEHVPCEGEVFDGCIFTETATRAGKKCNFMFTGILYRRRNGAVYWLFSFYGLEKRKGVDFAADVSRLSKGILNERLQVLI SCVARWLVVHMY >Mature_92_residues MEHVPCEGEVFDGCIFTETATRAGKKCNFMFTGILYRRRNGAVYWLFSFYGLEKRKGVDFAADVSRLSKGILNERLQVLI SCVARWLVVHMY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10618; Mature: 10618
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHVPCEGEVFDGCIFTETATRAGKKCNFMFTGILYRRRNGAVYWLFSFYGLEKRKGVDF CCCCCCCCCEECCEEECHHHHHCCCCCCEEEEEEEEECCCCCEEEEEHHHCCCCCCCCCH AADVSRLSKGILNERLQVLISCVARWLVVHMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEHVPCEGEVFDGCIFTETATRAGKKCNFMFTGILYRRRNGAVYWLFSFYGLEKRKGVDF CCCCCCCCCEECCEEECHHHHHCCCCCCEEEEEEEEECCCCCEEEEEHHHCCCCCCCCCH AADVSRLSKGILNERLQVLISCVARWLVVHMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA