| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734606
Identifier: 187734606
GI number: 187734606
Start: 119968
End: 120726
Strand: Reverse
Name: 187734606
Synonym: Amuc_0092
Alternate gene names: NA
Gene position: 120726-119968 (Counterclockwise)
Preceding gene: 187734607
Following gene: 187734605
Centisome position: 4.53
GC content: 57.44
Gene sequence:
>759_bases ATGAACGATAACTGGTGGGCCATTGCCTCTCTCATCCTCTCCCTGGCTTTCACAGGGCTGGGATGGCGCCTGCTGGCTTC CGGTCGGCGGTTTTTATATGCCCATCTTTGGATGGCGTGCCTCTTTGTTCTCCAGACAGGGGCGCTATGCGTCAAAGCGT ACCAGACGGGAATGTGTCCCATCCGCGGCGCTTCAGAGGTGCTCTTCTTCCTCTCCTGGAGCATCAATCTCTTTTATCTG ATGCTGGGACGTGCTTACCGAATGTCCGTGCTTGGCATCTTTACGGCTCCGGCTATTGCCGTGCTGACGGTTTTTTCCCT GCTGATAGGCCGTTCCGGAGCGGACGTGCAGGGCACGCATGACTTCTGGGTGACGGCACATGTGGGCATAGCCATGATGT CCTACGGAGCCGGCGGCCTGGCCGCTGCCGCGGGGGCGGCGTTCTGCATGCAGAATGAATGTCTTAAAAGACACCGAATT CCCGGTACCTGCCGTGTGCTTCCTCCCATCCGTACACTGGAAGCCAGCATGAAGCGCCTGGTTCTTGTGGCATTCCTCCT TCTTCTGCTTGGGGAATGGCTTGGGTGGCGGGGGAATCTCCCCATTAATGCGGCCAAGACCTCCATTGTCATTCTTCTCA CGGCAGGCTACAGCGTCCTGCTGTGGTTCATCTACCGCCGCGGCATTCCGGGAAGGATGTTGGCCTGCTGCTGCGTGGCC CTCTTTATTGCATCCATGAGCATTTTCCTGGTAAGTTGA
Upstream 100 bases:
>100_bases ACCGGGTGGAAGCGGAAAATTTTGAATCCATCCATAACCACCAGGCATACGCCGTCATTGAGCGCGATTTGCGTTCCTGA ACCATTTCCGGGCCGGATTT
Downstream 100 bases:
>100_bases TGAGAATGGTTTGTTTAGGCTTGAATCACCGGACCGCTCCCGTGGAAATACGGGAGCGGTTTGCCGTGCCGTCCCATAAA CTCCGGGAGGAAGGACAGCG
Product: cytochrome c assembly protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MNDNWWAIASLILSLAFTGLGWRLLASGRRFLYAHLWMACLFVLQTGALCVKAYQTGMCPIRGASEVLFFLSWSINLFYL MLGRAYRMSVLGIFTAPAIAVLTVFSLLIGRSGADVQGTHDFWVTAHVGIAMMSYGAGGLAAAAGAAFCMQNECLKRHRI PGTCRVLPPIRTLEASMKRLVLVAFLLLLLGEWLGWRGNLPINAAKTSIVILLTAGYSVLLWFIYRRGIPGRMLACCCVA LFIASMSIFLVS
Sequences:
>Translated_252_residues MNDNWWAIASLILSLAFTGLGWRLLASGRRFLYAHLWMACLFVLQTGALCVKAYQTGMCPIRGASEVLFFLSWSINLFYL MLGRAYRMSVLGIFTAPAIAVLTVFSLLIGRSGADVQGTHDFWVTAHVGIAMMSYGAGGLAAAAGAAFCMQNECLKRHRI PGTCRVLPPIRTLEASMKRLVLVAFLLLLLGEWLGWRGNLPINAAKTSIVILLTAGYSVLLWFIYRRGIPGRMLACCCVA LFIASMSIFLVS >Mature_252_residues MNDNWWAIASLILSLAFTGLGWRLLASGRRFLYAHLWMACLFVLQTGALCVKAYQTGMCPIRGASEVLFFLSWSINLFYL MLGRAYRMSVLGIFTAPAIAVLTVFSLLIGRSGADVQGTHDFWVTAHVGIAMMSYGAGGLAAAAGAAFCMQNECLKRHRI PGTCRVLPPIRTLEASMKRLVLVAFLLLLLGEWLGWRGNLPINAAKTSIVILLTAGYSVLLWFIYRRGIPGRMLACCCVA LFIASMSIFLVS
Specific function: Unknown
COG id: COG0755
COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27625; Mature: 27625
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDNWWAIASLILSLAFTGLGWRLLASGRRFLYAHLWMACLFVLQTGALCVKAYQTGMCP CCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IRGASEVLFFLSWSINLFYLMLGRAYRMSVLGIFTAPAIAVLTVFSLLIGRSGADVQGTH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DFWVTAHVGIAMMSYGAGGLAAAAGAAFCMQNECLKRHRIPGTCRVLPPIRTLEASMKRL CEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHH VLVAFLLLLLGEWLGWRGNLPINAAKTSIVILLTAGYSVLLWFIYRRGIPGRMLACCCVA HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHH LFIASMSIFLVS HHHHHHHHHHCC >Mature Secondary Structure MNDNWWAIASLILSLAFTGLGWRLLASGRRFLYAHLWMACLFVLQTGALCVKAYQTGMCP CCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IRGASEVLFFLSWSINLFYLMLGRAYRMSVLGIFTAPAIAVLTVFSLLIGRSGADVQGTH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DFWVTAHVGIAMMSYGAGGLAAAAGAAFCMQNECLKRHRIPGTCRVLPPIRTLEASMKRL CEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHH VLVAFLLLLLGEWLGWRGNLPINAAKTSIVILLTAGYSVLLWFIYRRGIPGRMLACCCVA HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHH LFIASMSIFLVS HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA