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The map label for this gene is ymdB [H]

Identifier: 187734586

GI number: 187734586

Start: 94451

End: 95254

Strand: Direct

Name: ymdB [H]

Synonym: Amuc_0072

Alternate gene names: 187734586

Gene position: 94451-95254 (Clockwise)

Preceding gene: 187734585

Following gene: 187734587

Centisome position: 3.55

GC content: 60.45

Gene sequence:

>804_bases
ATGATTACCATACTCTTTATAGGCGATGTGGTCGGCGAACCCGGACGCACCGCCGTGAAACACATGTTGCCGGAACTCAA
ACGGGAACACGGGGCGGACTTCATCATCGTCAACGGGGAAAACGCGGCTGCCGGGAGAGGTATCACGCCCCGTCTGGCAC
AGGAACTGCTGCACGCCGGAGTGGATGTCATCACAACGGGAGACCATGTCTGGGACCAGGCGGAGCTGGCCCCGTGGATG
GAATCCGAACCGCGGGTGCTGCGCCCCGTCAACTATCCGCAGGGAACACCGGGGCACGGAAGCGTAGTCGTGGAAACTCC
CAAGGGGAAAATAGCCGTCATGCAGGTTCAGGGGCGCTCATTCATTCAGCCGCCGCTGGAAAACCCCTTCCTCATCTCGG
AAGCGGAAGCCAAAAGGCTCAGGGAAGAAAAAGGCGTGCGGGTTATCTTTGTGGACATGCACGCGGAAACGACCAGTGAA
AAAATCTCCACCGGCTACAATCTGGACGGCCTGGTTTCCGCCGTCGTCGGGACACATACCCATGTGCAGACGGCGGATGA
AACCATTCTGGAGCGCGGCACGGCCTACCTGACGGATGCCGGCATGTGCGGCCCTGCCGTCGGGGTGCTGGGACGGGAAC
GGGAACCTATTCTCCAGCGTTTCCGCACCTCCATGCCGGCCAAATTCCCCGTAGCGAACTGGCCCGTGCGCCTCTGCGGA
GCCGTCGTGCAAATAGATGAAGCCACAGGCAGGGCGCTCAGCATCGCCCGCATCAATAAAATCGTGGAAAAACCGGCCTC
CTGA

Upstream 100 bases:

>100_bases
AAGCTCCGTGATGCGGAAATCCCCCGTGCCCGTTCTGGTAGTGCCCGTCACCAGGGAAGAACAGTAAAAACCGCCATCTG
CGCCAGCTCCGTCCCAATCC

Downstream 100 bases:

>100_bases
CATGCATGCTTCAGCAGCATTCCTCTTCCCGTGCCCGGTGGCGGCTCTCTGCGGATGTTCCGAACATGGCGGAAGCCTCG
TGAAGCGCGACCAGAACGCG

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MITILFIGDVVGEPGRTAVKHMLPELKREHGADFIIVNGENAAAGRGITPRLAQELLHAGVDVITTGDHVWDQAELAPWM
ESEPRVLRPVNYPQGTPGHGSVVVETPKGKIAVMQVQGRSFIQPPLENPFLISEAEAKRLREEKGVRVIFVDMHAETTSE
KISTGYNLDGLVSAVVGTHTHVQTADETILERGTAYLTDAGMCGPAVGVLGREREPILQRFRTSMPAKFPVANWPVRLCG
AVVQIDEATGRALSIARINKIVEKPAS

Sequences:

>Translated_267_residues
MITILFIGDVVGEPGRTAVKHMLPELKREHGADFIIVNGENAAAGRGITPRLAQELLHAGVDVITTGDHVWDQAELAPWM
ESEPRVLRPVNYPQGTPGHGSVVVETPKGKIAVMQVQGRSFIQPPLENPFLISEAEAKRLREEKGVRVIFVDMHAETTSE
KISTGYNLDGLVSAVVGTHTHVQTADETILERGTAYLTDAGMCGPAVGVLGREREPILQRFRTSMPAKFPVANWPVRLCG
AVVQIDEATGRALSIARINKIVEKPAS
>Mature_267_residues
MITILFIGDVVGEPGRTAVKHMLPELKREHGADFIIVNGENAAAGRGITPRLAQELLHAGVDVITTGDHVWDQAELAPWM
ESEPRVLRPVNYPQGTPGHGSVVVETPKGKIAVMQVQGRSFIQPPLENPFLISEAEAKRLREEKGVRVIFVDMHAETTSE
KISTGYNLDGLVSAVVGTHTHVQTADETILERGTAYLTDAGMCGPAVGVLGREREPILQRFRTSMPAKFPVANWPVRLCG
AVVQIDEATGRALSIARINKIVEKPAS

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28960; Mature: 28960

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITILFIGDVVGEPGRTAVKHMLPELKREHGADFIIVNGENAAAGRGITPRLAQELLHAG
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCC
VDVITTGDHVWDQAELAPWMESEPRVLRPVNYPQGTPGHGSVVVETPKGKIAVMQVQGRS
CCEEECCCHHCCHHHCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCEEEEEECCCC
FIQPPLENPFLISEAEAKRLREEKGVRVIFVDMHAETTSEKISTGYNLDGLVSAVVGTHT
CCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCHHHHHHHHHCCCC
HVQTADETILERGTAYLTDAGMCGPAVGVLGREREPILQRFRTSMPAKFPVANWPVRLCG
HHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHH
AVVQIDEATGRALSIARINKIVEKPAS
HHEEEECCCCCEEHHHHHHHHHHCCCC
>Mature Secondary Structure
MITILFIGDVVGEPGRTAVKHMLPELKREHGADFIIVNGENAAAGRGITPRLAQELLHAG
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCC
VDVITTGDHVWDQAELAPWMESEPRVLRPVNYPQGTPGHGSVVVETPKGKIAVMQVQGRS
CCEEECCCHHCCHHHCCCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCEEEEEECCCC
FIQPPLENPFLISEAEAKRLREEKGVRVIFVDMHAETTSEKISTGYNLDGLVSAVVGTHT
CCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCHHHHHHHHHCCCC
HVQTADETILERGTAYLTDAGMCGPAVGVLGREREPILQRFRTSMPAKFPVANWPVRLCG
HHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHH
AVVQIDEATGRALSIARINKIVEKPAS
HHEEEECCCCCEEHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]