| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734546
Identifier: 187734546
GI number: 187734546
Start: 38259
End: 39353
Strand: Reverse
Name: 187734546
Synonym: Amuc_0030
Alternate gene names: NA
Gene position: 39353-38259 (Counterclockwise)
Preceding gene: 187734547
Following gene: 187734545
Centisome position: 1.48
GC content: 56.89
Gene sequence:
>1095_bases ATGCACGATCTCAAGGCTGTATCAACCCTGTTCGATCTCCGCGGCGATTTTGTCCACGGTTATTCCTACGGCAGCGGCCA CATCAATGACACCTACTGTATCTGGGTGGATCAGGCGGGACAGCGCATCCGCTACATCCTCCAGCGCGTGAACCATAACG TGTTCAAGCAGCCCATCCCTCTGATGGAGAACGTAAAGCGCGTGACGGACCACGCCCTGAAGCGCCTGAAGGAGGAACAG TGCCCGGAAGCTTACCGCCGCACTCTCACGCTGGTTCCCTCCGTGGACGGCAAGCCGTACGCCCTGGATTCGGACGGCAA CTGCTGGCGCGTGTACCCGTTCATTGAACGCGCACGCACGTATGACCAGATTGAAACTACCAGGCAGTGCCAGGAAGCGG CGCGCGCCTTCGGCGAATTCCAGAAGCTCACGGCAGACCTGCCCGGAGAGCCCCTGTTTGAAACCATTCCCAATTTCCAC AATACCACTTCCCGCCTGGCGGCTCTGAAAGAGGCCATCCAGTCCGACCCCCTGGGGCGCGTGAAGGAAGTGCAGAAGGA AATAGACTGGTACCTTTCCCGTGAGTCGGACTGCCATCTGGTGGTGGATTACCTGAAATCCGGGGAATTGCCCCTGCGCT GTACGCACAATGATACCAAGCTGAACAATGTGATGCTGGACGATGTAACCGGAGAAGGCATTTGCGTGATTGACCTGGAT ACCACGATGCCCGGTTCCGCCATTTACGACTTCGGCGACATGATCCGGACGGCTACGTCTCCCGCCGCGGAAGATGAAAA GGACGTCTCCAAGGTCACGATGCGCATGTTCATGTTTGAAGCTCTGGTTCAGGGTTACCTGAGTTCAGCCAAGAGTTTCC TGACGCCTCTGGAAAAGAGCCTGCTGCCGTTCTCCGGCAAATTGCTCACGATGGAATGCGGCATCCGCTTCCTGACGGAC TACCTGTCCGGTGACGTGTATTTTAAAATCCACCGTCCGGAACACAACCTGGACCGCTGCCGCACGCAGATGGCCCTGGT AGAATCCATTGAGGCGCAGATGGATGAAATGAAGGCCATTGTGGACCGCTATTAA
Upstream 100 bases:
>100_bases CATGACCTATCCGGGGGACAAGCCCATGGTTGTGGAAGGCATCAACAAACTTATCCAGCAGGGCGTATACCCTGAAAAGC TCAACTAAGCCTTTTTCCCT
Downstream 100 bases:
>100_bases CCAATATCTACCAACATCGGAAAAACATGAAGATTCTCGTAACCGGCGGCGCCGGATTCATCGGTTCCCACATTGTGGAA CACTATCAGGATAAGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Mucin-Desulfating Sulfatase; Desulfatase Possibly For Mucin; N-Acetylhexosamine-1-Kinase NahK; Phosphotransferase Family Protein; Phosphotransferase Family; Homoserine/Choline Kinase Family Protein; Desulfatase; Phosphotransferase
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MHDLKAVSTLFDLRGDFVHGYSYGSGHINDTYCIWVDQAGQRIRYILQRVNHNVFKQPIPLMENVKRVTDHALKRLKEEQ CPEAYRRTLTLVPSVDGKPYALDSDGNCWRVYPFIERARTYDQIETTRQCQEAARAFGEFQKLTADLPGEPLFETIPNFH NTTSRLAALKEAIQSDPLGRVKEVQKEIDWYLSRESDCHLVVDYLKSGELPLRCTHNDTKLNNVMLDDVTGEGICVIDLD TTMPGSAIYDFGDMIRTATSPAAEDEKDVSKVTMRMFMFEALVQGYLSSAKSFLTPLEKSLLPFSGKLLTMECGIRFLTD YLSGDVYFKIHRPEHNLDRCRTQMALVESIEAQMDEMKAIVDRY
Sequences:
>Translated_364_residues MHDLKAVSTLFDLRGDFVHGYSYGSGHINDTYCIWVDQAGQRIRYILQRVNHNVFKQPIPLMENVKRVTDHALKRLKEEQ CPEAYRRTLTLVPSVDGKPYALDSDGNCWRVYPFIERARTYDQIETTRQCQEAARAFGEFQKLTADLPGEPLFETIPNFH NTTSRLAALKEAIQSDPLGRVKEVQKEIDWYLSRESDCHLVVDYLKSGELPLRCTHNDTKLNNVMLDDVTGEGICVIDLD TTMPGSAIYDFGDMIRTATSPAAEDEKDVSKVTMRMFMFEALVQGYLSSAKSFLTPLEKSLLPFSGKLLTMECGIRFLTD YLSGDVYFKIHRPEHNLDRCRTQMALVESIEAQMDEMKAIVDRY >Mature_364_residues MHDLKAVSTLFDLRGDFVHGYSYGSGHINDTYCIWVDQAGQRIRYILQRVNHNVFKQPIPLMENVKRVTDHALKRLKEEQ CPEAYRRTLTLVPSVDGKPYALDSDGNCWRVYPFIERARTYDQIETTRQCQEAARAFGEFQKLTADLPGEPLFETIPNFH NTTSRLAALKEAIQSDPLGRVKEVQKEIDWYLSRESDCHLVVDYLKSGELPLRCTHNDTKLNNVMLDDVTGEGICVIDLD TTMPGSAIYDFGDMIRTATSPAAEDEKDVSKVTMRMFMFEALVQGYLSSAKSFLTPLEKSLLPFSGKLLTMECGIRFLTD YLSGDVYFKIHRPEHNLDRCRTQMALVESIEAQMDEMKAIVDRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41665; Mature: 41665
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDLKAVSTLFDLRGDFVHGYSYGSGHINDTYCIWVDQAGQRIRYILQRVNHNVFKQPIP CCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCHHHHHCCCC LMENVKRVTDHALKRLKEEQCPEAYRRTLTLVPSVDGKPYALDSDGNCWRVYPFIERART HHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCCCCEEECCCCCEEEECHHHHHHHH YDQIETTRQCQEAARAFGEFQKLTADLPGEPLFETIPNFHNTTSRLAALKEAIQSDPLGR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHH VKEVQKEIDWYLSRESDCHLVVDYLKSGELPLRCTHNDTKLNNVMLDDVTGEGICVIDLD HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCCCEEEEEEC TTMPGSAIYDFGDMIRTATSPAAEDEKDVSKVTMRMFMFEALVQGYLSSAKSFLTPLEKS CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPFSGKLLTMECGIRFLTDYLSGDVYFKIHRPEHNLDRCRTQMALVESIEAQMDEMKAI HCCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH VDRY HHCC >Mature Secondary Structure MHDLKAVSTLFDLRGDFVHGYSYGSGHINDTYCIWVDQAGQRIRYILQRVNHNVFKQPIP CCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCHHHHHCCCC LMENVKRVTDHALKRLKEEQCPEAYRRTLTLVPSVDGKPYALDSDGNCWRVYPFIERART HHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCCCCEEECCCCCEEEECHHHHHHHH YDQIETTRQCQEAARAFGEFQKLTADLPGEPLFETIPNFHNTTSRLAALKEAIQSDPLGR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHH VKEVQKEIDWYLSRESDCHLVVDYLKSGELPLRCTHNDTKLNNVMLDDVTGEGICVIDLD HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCCCEEEEEEC TTMPGSAIYDFGDMIRTATSPAAEDEKDVSKVTMRMFMFEALVQGYLSSAKSFLTPLEKS CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPFSGKLLTMECGIRFLTDYLSGDVYFKIHRPEHNLDRCRTQMALVESIEAQMDEMKAI HCCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH VDRY HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA