Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is yfbL [C]

Identifier: 187734535

GI number: 187734535

Start: 24455

End: 25414

Strand: Direct

Name: yfbL [C]

Synonym: Amuc_0019

Alternate gene names: 187734535

Gene position: 24455-25414 (Clockwise)

Preceding gene: 187734534

Following gene: 187734538

Centisome position: 0.92

GC content: 59.38

Gene sequence:

>960_bases
ATGATGCCCCGCATGCATCCCTCCGCCTTCCTGTCTTCCGGATTCCTGCTGCTGTCCACCGGTCTTTCCTCCTGCACATT
TCTTCCCATGTTTTCCTCCGGAGGGCAGGAAACGCCGCGGACCCTGGGCGCACGCATGGAAAAACACACGGAAGTCCTGC
AAAAAGACATCGGGGAAAGAAACGCCAGCCAGCCCAAATCCATGGAAGCCGCCGCCAAATACATCGCCGGGAATTTCTCG
GACATGGGGTACGCCGTCACCATGCAGCCCGTATCCGGAGGAAACGTGAAAAAAGGAGCGGCCATTTACAACATCCTGGT
TTACAAGCCCGGCCTGTATTCCAACAATCAAAGCATCGTCGTGGGAGCCAATTATGATTCCAGCGGACAGCGCAACAACG
GCAGCGGAACGGCCCTGCTGCTGGAGACGGCGAGAGGCCTGAAAGACATCCCCACCAATCACAATATCTATTTTGTCGCA
TACGCGAACGGAGCGGAGCCCGCAGGGAAATCCATCTCTTCCGGAGCCTGCGTGCATGCCAGCACCCTAAGCGGCAGCAT
TGGAGCAACCAACATCCTGGGCATGATCAATCTGGAACCCCAGAAGCTGGATGCCGGAGGGGAACGAAAACAGCCGGGCC
CGGAATCCTCCCGGGAAGCCGTTCTGTTCACGACCACCCCGCACGGCAAGAAATTTGCTGGCCAGTGCGCCGCCCCCTTC
GCCAAATCCTGGGAGCAGGCGCCCGCTACCTTCCACCGGGAACCTTCCGCCCTCACAGGCAATGACCGCCATTACGCGGT
CCTGGGCATTCCCACGGTCTCCTGCCGGAGCAAGTATCCCGTCACGGATGCCCGTACGGAAGAGTATGTGCAGGCGCTGA
CGGACATGATTCACCAGGTAGCGGACAACGACGCGCCCGAACCGGCAAAAAACGCCGGCCAGGGCGAGAAAGCATCCTGA

Upstream 100 bases:

>100_bases
GTGGAAACCTATACCTGGAGCGTCCTGCCGGACCACATGAAGATCCCCCTGGCAGCCCAGATTGCCCGTGAACTGCATTA
TATTGAAACCCTGTAAAGCC

Downstream 100 bases:

>100_bases
CGTTTCCCTCTCTCCCCGTTACCGGGACAGCTTTCTCCTTCCGTGGCCGCCGCCCAGCATCAGCACAGGCATGAAGGAAA
GGGCCACCAGCGCAATAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase; Glutaminyl-Peptide Cyclotransferase

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MMPRMHPSAFLSSGFLLLSTGLSSCTFLPMFSSGGQETPRTLGARMEKHTEVLQKDIGERNASQPKSMEAAAKYIAGNFS
DMGYAVTMQPVSGGNVKKGAAIYNILVYKPGLYSNNQSIVVGANYDSSGQRNNGSGTALLLETARGLKDIPTNHNIYFVA
YANGAEPAGKSISSGACVHASTLSGSIGATNILGMINLEPQKLDAGGERKQPGPESSREAVLFTTTPHGKKFAGQCAAPF
AKSWEQAPATFHREPSALTGNDRHYAVLGIPTVSCRSKYPVTDARTEEYVQALTDMIHQVADNDAPEPAKNAGQGEKAS

Sequences:

>Translated_319_residues
MMPRMHPSAFLSSGFLLLSTGLSSCTFLPMFSSGGQETPRTLGARMEKHTEVLQKDIGERNASQPKSMEAAAKYIAGNFS
DMGYAVTMQPVSGGNVKKGAAIYNILVYKPGLYSNNQSIVVGANYDSSGQRNNGSGTALLLETARGLKDIPTNHNIYFVA
YANGAEPAGKSISSGACVHASTLSGSIGATNILGMINLEPQKLDAGGERKQPGPESSREAVLFTTTPHGKKFAGQCAAPF
AKSWEQAPATFHREPSALTGNDRHYAVLGIPTVSCRSKYPVTDARTEEYVQALTDMIHQVADNDAPEPAKNAGQGEKAS
>Mature_319_residues
MMPRMHPSAFLSSGFLLLSTGLSSCTFLPMFSSGGQETPRTLGARMEKHTEVLQKDIGERNASQPKSMEAAAKYIAGNFS
DMGYAVTMQPVSGGNVKKGAAIYNILVYKPGLYSNNQSIVVGANYDSSGQRNNGSGTALLLETARGLKDIPTNHNIYFVA
YANGAEPAGKSISSGACVHASTLSGSIGATNILGMINLEPQKLDAGGERKQPGPESSREAVLFTTTPHGKKFAGQCAAPF
AKSWEQAPATFHREPSALTGNDRHYAVLGIPTVSCRSKYPVTDARTEEYVQALTDMIHQVADNDAPEPAKNAGQGEKAS

Specific function: Unknown

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33777; Mature: 33777

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPRMHPSAFLSSGFLLLSTGLSSCTFLPMFSSGGQETPRTLGARMEKHTEVLQKDIGER
CCCCCCHHHHHHCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
NASQPKSMEAAAKYIAGNFSDMGYAVTMQPVSGGNVKKGAAIYNILVYKPGLYSNNQSIV
CCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEE
VGANYDSSGQRNNGSGTALLLETARGLKDIPTNHNIYFVAYANGAEPAGKSISSGACVHA
EECCCCCCCCCCCCCCCEEEEEHHCCHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEE
STLSGSIGATNILGMINLEPQKLDAGGERKQPGPESSREAVLFTTTPHGKKFAGQCAAPF
CCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCCHH
AKSWEQAPATFHREPSALTGNDRHYAVLGIPTVSCRSKYPVTDARTEEYVQALTDMIHQV
HHHHHHCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ADNDAPEPAKNAGQGEKAS
HCCCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MMPRMHPSAFLSSGFLLLSTGLSSCTFLPMFSSGGQETPRTLGARMEKHTEVLQKDIGER
CCCCCCHHHHHHCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
NASQPKSMEAAAKYIAGNFSDMGYAVTMQPVSGGNVKKGAAIYNILVYKPGLYSNNQSIV
CCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEE
VGANYDSSGQRNNGSGTALLLETARGLKDIPTNHNIYFVAYANGAEPAGKSISSGACVHA
EECCCCCCCCCCCCCCCEEEEEHHCCHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEE
STLSGSIGATNILGMINLEPQKLDAGGERKQPGPESSREAVLFTTTPHGKKFAGQCAAPF
CCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCCHH
AKSWEQAPATFHREPSALTGNDRHYAVLGIPTVSCRSKYPVTDARTEEYVQALTDMIHQV
HHHHHHCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ADNDAPEPAKNAGQGEKAS
HCCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA