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The map label for this gene is ybgI [C]

Identifier: 187734523

GI number: 187734523

Start: 8914

End: 9693

Strand: Direct

Name: ybgI [C]

Synonym: Amuc_0007

Alternate gene names: 187734523

Gene position: 8914-9693 (Clockwise)

Preceding gene: 187734522

Following gene: 187734524

Centisome position: 0.33

GC content: 61.41

Gene sequence:

>780_bases
ATGAGCAAGATTGAGCTGCACACCGCCATCTCCTTTCTGGACGGAATCCTCTCCGTGAATTCCATTCCGGACGCCCCCCG
CGCCCTGAACGGCCTTCAACTGGAAAACGGGGGCACCGTTTCCAAGGTGGCCGCCGCCGTGGACGGCTCAGAAAAGGCCA
TTCATGCGGCCTTGGAAACAGGTGCGGACCTGCTCCTTCTTCACCACGGCATTTTCTGGCAGCCCATGCAGCCCATTACC
GGCATCGCCTACCGGAAGCTGAAAGCCGCCATGGACGGGAACCTGGCGATTTACGCCGCCCACCTTCCTCTGGACGTCCA
CCCCGCATACGGCAACAATGCCCTGCTGGCGAAGGCCTGCGGCCTCCGGCCATGTTCCCATGATGGGCTGGACTACCACG
GCGTTTCCCTCGGTACGCACGGAGAATTTCCAGGTACATGCGCGGAATTGGAGCAAAAACTGGAAACCGTCCTCGGCGCG
CCCGTGCAGGCCTTCTGGAAAGATTCCCCGGAGGCTCCGGCCGGAGATATCTTCATCTGTACCGGAGGCGCGGGAGACGA
TCTTGCCCAGGCAGCGGCCCTCGGCTGCCGCACCTACGTGACCGGGGAAGGCTCCCACTGGAACATCCCCCTGGCCCAGG
AACTGGGCGTCAATCTGGTCTTCGGCGGCCACTACTTTACGGAGACGTTCGGCGTAAAGGCCCTGGGGCTTCTTCTCAAG
GATGTTTACGGGCTGGATTATACCTTTATTGACCTGCCGCCCTCCGCCTACAGCCATTGA

Upstream 100 bases:

>100_bases
GGCAGAGTAAATACAACCCCGAATTATTTTATCCTGAACATGGACGCCGTACGTCTGCTCGGCGCCAGCCTTTCGGAAGA
CAACTAACCACTCCTCCCGC

Downstream 100 bases:

>100_bases
CCAAACGCCACGGAACATGAATCTGACTACGGACGACGCCGACGGGAAAATCCGCCTGGATCAATACCTTGCCGCCCACC
TTCCGGAGCTTTCCCGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSKIELHTAISFLDGILSVNSIPDAPRALNGLQLENGGTVSKVAAAVDGSEKAIHAALETGADLLLLHHGIFWQPMQPIT
GIAYRKLKAAMDGNLAIYAAHLPLDVHPAYGNNALLAKACGLRPCSHDGLDYHGVSLGTHGEFPGTCAELEQKLETVLGA
PVQAFWKDSPEAPAGDIFICTGGAGDDLAQAAALGCRTYVTGEGSHWNIPLAQELGVNLVFGGHYFTETFGVKALGLLLK
DVYGLDYTFIDLPPSAYSH

Sequences:

>Translated_259_residues
MSKIELHTAISFLDGILSVNSIPDAPRALNGLQLENGGTVSKVAAAVDGSEKAIHAALETGADLLLLHHGIFWQPMQPIT
GIAYRKLKAAMDGNLAIYAAHLPLDVHPAYGNNALLAKACGLRPCSHDGLDYHGVSLGTHGEFPGTCAELEQKLETVLGA
PVQAFWKDSPEAPAGDIFICTGGAGDDLAQAAALGCRTYVTGEGSHWNIPLAQELGVNLVFGGHYFTETFGVKALGLLLK
DVYGLDYTFIDLPPSAYSH
>Mature_258_residues
SKIELHTAISFLDGILSVNSIPDAPRALNGLQLENGGTVSKVAAAVDGSEKAIHAALETGADLLLLHHGIFWQPMQPITG
IAYRKLKAAMDGNLAIYAAHLPLDVHPAYGNNALLAKACGLRPCSHDGLDYHGVSLGTHGEFPGTCAELEQKLETVLGAP
VQAFWKDSPEAPAGDIFICTGGAGDDLAQAAALGCRTYVTGEGSHWNIPLAQELGVNLVFGGHYFTETFGVKALGLLLKD
VYGLDYTFIDLPPSAYSH

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=260, Percent_Identity=33.8461538461538, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27300; Mature: 27169

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIELHTAISFLDGILSVNSIPDAPRALNGLQLENGGTVSKVAAAVDGSEKAIHAALET
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCEEECCCCCHHHHHHHCCCCHHHHHHHHHC
GADLLLLHHGIFWQPMQPITGIAYRKLKAAMDGNLAIYAAHLPLDVHPAYGNNALLAKAC
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCEEEEHHC
GLRPCSHDGLDYHGVSLGTHGEFPGTCAELEQKLETVLGAPVQAFWKDSPEAPAGDIFIC
CCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEE
TGGAGDDLAQAAALGCRTYVTGEGSHWNIPLAQELGVNLVFGGHYFTETFGVKALGLLLK
ECCCCHHHHHHHHHCCEEEEECCCCEECCCCHHHCCCEEEECCCHHHHHHHHHHHHHHHH
DVYGLDYTFIDLPPSAYSH
HHHCCCEEEEECCCHHCCC
>Mature Secondary Structure 
SKIELHTAISFLDGILSVNSIPDAPRALNGLQLENGGTVSKVAAAVDGSEKAIHAALET
CCCHHHHHHHHHHHHHHCCCCCCCCHHHCCEEECCCCCHHHHHHHCCCCHHHHHHHHHC
GADLLLLHHGIFWQPMQPITGIAYRKLKAAMDGNLAIYAAHLPLDVHPAYGNNALLAKAC
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCEEEEHHC
GLRPCSHDGLDYHGVSLGTHGEFPGTCAELEQKLETVLGAPVQAFWKDSPEAPAGDIFIC
CCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEE
TGGAGDDLAQAAALGCRTYVTGEGSHWNIPLAQELGVNLVFGGHYFTETFGVKALGLLLK
ECCCCHHHHHHHHHCCEEEEECCCCEECCCCHHHCCCEEEECCCHHHHHHHHHHHHHHHH
DVYGLDYTFIDLPPSAYSH
HHHCCCEEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]