| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734522
Identifier: 187734522
GI number: 187734522
Start: 6846
End: 8900
Strand: Direct
Name: 187734522
Synonym: Amuc_0006
Alternate gene names: NA
Gene position: 6846-8900 (Clockwise)
Preceding gene: 187734521
Following gene: 187734523
Centisome position: 0.26
GC content: 56.64
Gene sequence:
>2055_bases ATGCGCACATTCCGTTTTATTCTTCTCATCCTCATCACCCTCGCTTCTGTCGGAGCAGCGGTGCTCCTCATGATTGACGG CAATCTGTCCCGCATCATCGGGCGCACCGCTTTCAGTTCCGGAGAACGGCTTTTCCCGTACACCCGGGAAGAAATGAACG AGGTTTCCTGGATGCGCATCAATTGCGTGGGAGATGTCGCGGAATTCCGCCGCAAACCCAACGGCGTCTGGTGGTGCGAA AAGCCCTGGAACGACCGTATGGATCCTCGCGCGGCGGCGGCCATTCTCCAGTACACGTACTCCACCAGCATCGTGGACGC ATTGCCCCTGCACAAGATTGATTCCGCATCCCTGAAGGAATTCGGCGTGAAAACCACTCCCGTTACCATCACTCTCAAGG AAATGAGCGACGACGGAAAGCGTTCCTCCACTGTGGCGCGCTATACGCTGGGTTCCCCGGCGCCCTGGCTGGTGGACGAT CCGGAGAACAAGACCACGGATGACACCACCTATATGCAGACGGATTTTTACGGCCGGGACACCCGCATTCTGGTGGGCAC CGGCAACATCCTCCCTCTGTTCAAATCCGGCATCCGCCAGCTTCGGGACCACCGTCCCCTGCTACTGCATCCGGCCATGC CCGCCTCCATTGAAATCAACAACCGGGGCCAGCGCATCGCCCTGGAGCGCAAGACTCCTGGCTCCCCCTGGAAAATCACG TATCCCCTCTCCCTGGATACGGACCCGGCCATGATGGATGTGCTGCTGGGCACGCTCCAGAAGCTGACCGCCGTGCGCGT GTACAACCCGGAGGAAACGAGCGTGCCGGATATGACGGATGATCAAATCACCTCCGTCTCCATCAGGAATTTCACAGGCC GCCTTTCAGGGGACGGCAAATCCCTGCAAATGGAGGAACAGCCCGTCACGCTCCGGATTTATCCTCCCTCGGACAACGGA AGCCTGTCCGAACTGGTCAAAGCCACCGTTTCCGACCGTAAGGCCGTCTTTGAATTGGCGCAAACGACGGAAACCAACAA GGAAGTTCCCGGCGTACGCAATATTCCGCTGGATCTGGGCCTTCTGCGTTCCAAGCAATTGACGGACATCGGGGATTACA AGATTACCGGCCTTTCCATCCGTAAAAGTTTTCAGGATTACCCTACCATCGCCCGCTTCATTCAGGGGGATGAGAAAAAA GGCATCAAGCCCACCTGGCTGTACACGGTAGAGGGCGCCCGTTACCAAGAAGCTAATCCGGAGCATCTCATTTCCCTGCT GAAAACCGTTAAACAGGGAAAAGTGGCCGGCTTCGCTTCGGACAAAGTTACGGACCTTTCCGTGTACGGGCTGGATAATC CCAGAATGACGCTCACCATGTCCCTTCTGCCCAAGCCCGGTGAAGAGCCACGCCCCCCCGTGACGGTGTTTTTCTCCAAG GGTGCGGACGGTTCCTGGTATGCCCGCCAGGCCGGAAAACCCACCGTCGCCATACTGGACAACGCCTACATGAAGGATTT GCTGACGGATGCACTGGCCTGGAAAAAAAAGAGGCTTTTTTCCTTCAGCAGGTTTGACCTCAGAGAAATGCACCTGGAAC GCATCGGTTCCGGAGGCCCCCTGGTTCTGAAATTCGACCGTCTGGACGATTCTTGGACAGCCTCCAAAGACGGGAAGGAT GAAACCTTGAATATCAACCCGAACCGCGCCAACCGCTATCTGGATGAACTGGAAAAAATGGAGGTGAGCGCCTGGCTCCC CTATACGGACGCCACAGCGCATGAAGCCCTGAAAAATCCCGTTTTCCGCCTGAAACTCATCCTCCAGTCTTACAAGGAGG CGGCCCCCGTGCAGTCCCAATCCGGTTCCAGCGACATTACCTTTGCCCCGGAACCGGAAACGGAGGACAAAGTCATCACG CTGGAAATCGCCCCGGCGGGAGAGGCCGGATACAGCAGATTTTATTACGGCAGAGTAAATACAACCCCGAATTATTTTAT CCTGAACATGGACGCCGTACGTCTGCTCGGCGCCAGCCTTTCGGAAGACAACTAA
Upstream 100 bases:
>100_bases CTGACGAATATCGGACTCCCCCTGCTGGCGCTGCTGATCGCCCTGATTATCTGGAACACGCGCCGTCATTAACTCCACCC ACGCCCATTACCGGAAGCAC
Downstream 100 bases:
>100_bases CCACTCCTCCCGCATGAGCAAGATTGAGCTGCACACCGCCATCTCCTTTCTGGACGGAATCCTCTCCGTGAATTCCATTC CGGACGCCCCCCGCGCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 684; Mature: 684
Protein sequence:
>684_residues MRTFRFILLILITLASVGAAVLLMIDGNLSRIIGRTAFSSGERLFPYTREEMNEVSWMRINCVGDVAEFRRKPNGVWWCE KPWNDRMDPRAAAAILQYTYSTSIVDALPLHKIDSASLKEFGVKTTPVTITLKEMSDDGKRSSTVARYTLGSPAPWLVDD PENKTTDDTTYMQTDFYGRDTRILVGTGNILPLFKSGIRQLRDHRPLLLHPAMPASIEINNRGQRIALERKTPGSPWKIT YPLSLDTDPAMMDVLLGTLQKLTAVRVYNPEETSVPDMTDDQITSVSIRNFTGRLSGDGKSLQMEEQPVTLRIYPPSDNG SLSELVKATVSDRKAVFELAQTTETNKEVPGVRNIPLDLGLLRSKQLTDIGDYKITGLSIRKSFQDYPTIARFIQGDEKK GIKPTWLYTVEGARYQEANPEHLISLLKTVKQGKVAGFASDKVTDLSVYGLDNPRMTLTMSLLPKPGEEPRPPVTVFFSK GADGSWYARQAGKPTVAILDNAYMKDLLTDALAWKKKRLFSFSRFDLREMHLERIGSGGPLVLKFDRLDDSWTASKDGKD ETLNINPNRANRYLDELEKMEVSAWLPYTDATAHEALKNPVFRLKLILQSYKEAAPVQSQSGSSDITFAPEPETEDKVIT LEIAPAGEAGYSRFYYGRVNTTPNYFILNMDAVRLLGASLSEDN
Sequences:
>Translated_684_residues MRTFRFILLILITLASVGAAVLLMIDGNLSRIIGRTAFSSGERLFPYTREEMNEVSWMRINCVGDVAEFRRKPNGVWWCE KPWNDRMDPRAAAAILQYTYSTSIVDALPLHKIDSASLKEFGVKTTPVTITLKEMSDDGKRSSTVARYTLGSPAPWLVDD PENKTTDDTTYMQTDFYGRDTRILVGTGNILPLFKSGIRQLRDHRPLLLHPAMPASIEINNRGQRIALERKTPGSPWKIT YPLSLDTDPAMMDVLLGTLQKLTAVRVYNPEETSVPDMTDDQITSVSIRNFTGRLSGDGKSLQMEEQPVTLRIYPPSDNG SLSELVKATVSDRKAVFELAQTTETNKEVPGVRNIPLDLGLLRSKQLTDIGDYKITGLSIRKSFQDYPTIARFIQGDEKK GIKPTWLYTVEGARYQEANPEHLISLLKTVKQGKVAGFASDKVTDLSVYGLDNPRMTLTMSLLPKPGEEPRPPVTVFFSK GADGSWYARQAGKPTVAILDNAYMKDLLTDALAWKKKRLFSFSRFDLREMHLERIGSGGPLVLKFDRLDDSWTASKDGKD ETLNINPNRANRYLDELEKMEVSAWLPYTDATAHEALKNPVFRLKLILQSYKEAAPVQSQSGSSDITFAPEPETEDKVIT LEIAPAGEAGYSRFYYGRVNTTPNYFILNMDAVRLLGASLSEDN >Mature_684_residues MRTFRFILLILITLASVGAAVLLMIDGNLSRIIGRTAFSSGERLFPYTREEMNEVSWMRINCVGDVAEFRRKPNGVWWCE KPWNDRMDPRAAAAILQYTYSTSIVDALPLHKIDSASLKEFGVKTTPVTITLKEMSDDGKRSSTVARYTLGSPAPWLVDD PENKTTDDTTYMQTDFYGRDTRILVGTGNILPLFKSGIRQLRDHRPLLLHPAMPASIEINNRGQRIALERKTPGSPWKIT YPLSLDTDPAMMDVLLGTLQKLTAVRVYNPEETSVPDMTDDQITSVSIRNFTGRLSGDGKSLQMEEQPVTLRIYPPSDNG SLSELVKATVSDRKAVFELAQTTETNKEVPGVRNIPLDLGLLRSKQLTDIGDYKITGLSIRKSFQDYPTIARFIQGDEKK GIKPTWLYTVEGARYQEANPEHLISLLKTVKQGKVAGFASDKVTDLSVYGLDNPRMTLTMSLLPKPGEEPRPPVTVFFSK GADGSWYARQAGKPTVAILDNAYMKDLLTDALAWKKKRLFSFSRFDLREMHLERIGSGGPLVLKFDRLDDSWTASKDGKD ETLNINPNRANRYLDELEKMEVSAWLPYTDATAHEALKNPVFRLKLILQSYKEAAPVQSQSGSSDITFAPEPETEDKVIT LEIAPAGEAGYSRFYYGRVNTTPNYFILNMDAVRLLGASLSEDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76623; Mature: 76623
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFRFILLILITLASVGAAVLLMIDGNLSRIIGRTAFSSGERLFPYTREEMNEVSWMRI CCHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEE NCVGDVAEFRRKPNGVWWCEKPWNDRMDPRAAAAILQYTYSTSIVDALPLHKIDSASLKE EEEHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH FGVKTTPVTITLKEMSDDGKRSSTVARYTLGSPAPWLVDDPENKTTDDTTYMQTDFYGRD CCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEEEEECCCC TRILVGTGNILPLFKSGIRQLRDHRPLLLHPAMPASIEINNRGQRIALERKTPGSPWKIT CEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCEEEEECCCCCCCEEEE YPLSLDTDPAMMDVLLGTLQKLTAVRVYNPEETSVPDMTDDQITSVSIRNFTGRLSGDGK EEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEECCEEEECCCCC SLQMEEQPVTLRIYPPSDNGSLSELVKATVSDRKAVFELAQTTETNKEVPGVRNIPLDLG EEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH LLRSKQLTDIGDYKITGLSIRKSFQDYPTIARFIQGDEKKGIKPTWLYTVEGARYQEANP HHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCH EHLISLLKTVKQGKVAGFASDKVTDLSVYGLDNPRMTLTMSLLPKPGEEPRPPVTVFFSK HHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEC GADGSWYARQAGKPTVAILDNAYMKDLLTDALAWKKKRLFSFSRFDLREMHLERIGSGGP CCCCCEEHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC LVLKFDRLDDSWTASKDGKDETLNINPNRANRYLDELEKMEVSAWLPYTDATAHEALKNP EEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHCH VFRLKLILQSYKEAAPVQSQSGSSDITFAPEPETEDKVITLEIAPAGEAGYSRFYYGRVN HHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEEC TTPNYFILNMDAVRLLGASLSEDN CCCCEEEEECHHHHHHCCCCCCCC >Mature Secondary Structure MRTFRFILLILITLASVGAAVLLMIDGNLSRIIGRTAFSSGERLFPYTREEMNEVSWMRI CCHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEE NCVGDVAEFRRKPNGVWWCEKPWNDRMDPRAAAAILQYTYSTSIVDALPLHKIDSASLKE EEEHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH FGVKTTPVTITLKEMSDDGKRSSTVARYTLGSPAPWLVDDPENKTTDDTTYMQTDFYGRD CCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEEEEECCCC TRILVGTGNILPLFKSGIRQLRDHRPLLLHPAMPASIEINNRGQRIALERKTPGSPWKIT CEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCEEEEECCCCCCCEEEE YPLSLDTDPAMMDVLLGTLQKLTAVRVYNPEETSVPDMTDDQITSVSIRNFTGRLSGDGK EEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEECCEEEECCCCC SLQMEEQPVTLRIYPPSDNGSLSELVKATVSDRKAVFELAQTTETNKEVPGVRNIPLDLG EEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH LLRSKQLTDIGDYKITGLSIRKSFQDYPTIARFIQGDEKKGIKPTWLYTVEGARYQEANP HHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCH EHLISLLKTVKQGKVAGFASDKVTDLSVYGLDNPRMTLTMSLLPKPGEEPRPPVTVFFSK HHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEC GADGSWYARQAGKPTVAILDNAYMKDLLTDALAWKKKRLFSFSRFDLREMHLERIGSGGP CCCCCEEHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC LVLKFDRLDDSWTASKDGKDETLNINPNRANRYLDELEKMEVSAWLPYTDATAHEALKNP EEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHCH VFRLKLILQSYKEAAPVQSQSGSSDITFAPEPETEDKVITLEIAPAGEAGYSRFYYGRVN HHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEEC TTPNYFILNMDAVRLLGASLSEDN CCCCEEEEECHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA