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The map label for this gene is ddpX

Identifier: 187733755

GI number: 187733755

Start: 1586671

End: 1587252

Strand: Reverse

Name: ddpX

Synonym: SbBS512_E1751

Alternate gene names: 187733755

Gene position: 1587252-1586671 (Counterclockwise)

Preceding gene: 187730158

Following gene: 187730477

Centisome position: 34.39

GC content: 52.75

Gene sequence:

>582_bases
ATGTTGGATACCACCGAACTGGTTGATTTAGCCGTAATCTTCCCTGATCTGGAGATCGAATTGAAATACGCCTGCGCTGA
TAACATCACAGGTAAAGCTATTTATCAGCAAGCGCGTTGTCTGCTACACAAGGATGCGATTACCGCGCTGGCGAAAAGTA
TCAGTATCGCCCAGCTGTCAGGCTTACAACTGGTGATTTACGATGCGTATCGCCCACAACAAGCACAGGCGATGTTGTGG
CAAGCCTGCCCAGACCCGCAATATGTTGTTGATGTGACGGTCGGTTCTAATCACAGCCGTGGCACGGCGATCGACCTGAC
GCTTCGTGATGAGCACGGGAACATCCTCAATATGGGCGCAGGGTTCGATGAAATGCACGAGCGCTCCCATGCCTATCACC
CTTCCGTCCCGCCCGCCGCTCAGCGCAATCGGCTGTTGCTGAATGCGATTATGACTGGTGGCGGTTTTGTCGGTATCTCC
AGCGAATGGTGGCACTTCGAATTACCCCAGGCAGCGAGTTACCCACTGCTCGCTGATCAATTCACCTGTTTTATATCCCC
TGGCACACAGCACGTCAGTTAA

Upstream 100 bases:

>100_bases
AATATAACTTTAAGCCAGCATTCTGGCGCTTATCCCGGCATGGAATGAGATCTGCATAAGCGGAAAGCGCAGCAATTTTT
GTCTTATACAGGAACCGTTT

Downstream 100 bases:

>100_bases
TCAGGAAACTGTCATGAAGAGATCGATACCGTTTCGTCCTACATTGCTCGCGCTCGTCCTTGCCACAACTTTCCCGGTTG
CGCACGCCGCCGTACCGAAA

Product: D-alanyl-D-alanine dipeptidase

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLW
QACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILNMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGIS
SEWWHFELPQAASYPLLADQFTCFISPGTQHVS

Sequences:

>Translated_193_residues
MLDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLW
QACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILNMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGIS
SEWWHFELPQAASYPLLADQFTCFISPGTQHVS
>Mature_193_residues
MLDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLW
QACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILNMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGIS
SEWWHFELPQAASYPLLADQFTCFISPGTQHVS

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

Organism=Escherichia coli, GI1787763, Length=193, Percent_Identity=98.4455958549223, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 21252; Mature: 21252

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLS
CCCCHHHEEEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
GLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILNMGA
CCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEECC
GFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGISSEWWHFELPQAASYPLLADQ
CHHHHHHHCCCCCCCCCCCHHCCEEEEEEEECCCEEEEECCCCEEEECCCCCCCCEECCC
FTCFISPGTQHVS
EEEEECCCCCCCC
>Mature Secondary Structure
MLDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLS
CCCCHHHEEEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
GLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILNMGA
CCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEECC
GFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGISSEWWHFELPQAASYPLLADQ
CHHHHHHHCCCCCCCCCCCHHCCEEEEEEEECCCEEEEECCCCEEEECCCCCCCCEECCC
FTCFISPGTQHVS
EEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9751644 [H]