Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is 187733297

Identifier: 187733297

GI number: 187733297

Start: 4424067

End: 4426142

Strand: Reverse

Name: 187733297

Synonym: SbBS512_E4741

Alternate gene names: NA

Gene position: 4426142-4424067 (Counterclockwise)

Preceding gene: 187733783

Following gene: 187730433

Centisome position: 95.89

GC content: 52.17

Gene sequence:

>2076_bases
ATGAGTCAGCTTGATGACACCATCCTTGATGCGCTGACGCACGTTACTTTCCCAAAGGGTTTTGCACAGGCAGAGCCCGC
ATGGGTTGTCACGGTAGACGGTGTTAATTACCCACTCTGGCAAACAGATGCCCTGGTAGTCGGCAGTGGTGCAGCAAGAT
TACGTGCGGCAGTTGAACTTAAACGCCGCCAGCAAAATGTGCTGATCGCTACCGCCGGGTTATATATGGGGACGTCGGCA
TGTTCTGGTTCCGATAAACAGACACTATTTACCGCCGCTACCGCGGGCAACGGCGACAACTTCACCAAACTGGCAGAGGC
ACTGGCGAGCGGTGGGGCGATGGATCACGACACCGCTTATGTCGAAGCGGTAGGTTCTCTGCACACTCTAGGCGGGTTGC
AATATCTTGGTCTGGAATTACCGGAAGATCGCTATGGCGCGATTCTTCGTTATCAAACCGACCATGACGAAGCCGGGCGT
GCAACCTCGTGTGGGCCGCGTACCTCAAGGTTAATGGTGAAAGTGCTGTTGGAAGAAGTACAGCGCCTCGCCATTCCAGT
GTTGACCAGTGCAACAGTGATTAAACTGCTGCATCAGCGTGACGAAAACGGCGAAGACCGCGTGGCAGGGGCAATCCTCG
CGACCGGTCATCGCGCCCATAACCCATGGGGGCTGGCAATTGTGACTGCGCCCAATGTGGTACTGGCAACGGGCGGACCG
GGCGAGCTTTATCGCGACAGTGTTTATCCACATAAATGCTTCGGCTCGCTGGGGCTGGCGCTGGAGGAAGGTCTGACGCT
AACCAATCTGACCGAAAGCCAGTTTGGTATAGGCACGCCGCGTAGCACGTTTCCGTGGAATTTATCCGGCACCTATGTAC
AGGTGATCCCGTATATCTATTCCGTGGATGCTGAGGGTAACGAGTATAACTTCCTCGCGGATTACTATCGCACCACCCAG
GAGCTGGCTTCAAACATTTTCCGTAAAGGCTATCAGTGGCCGTTCCACGCCACTCGGGTGATGGATTTTGGCTCCAGCTT
GTTAGATATGGCAGTAGCGCAAGAGCAGCAATCAGGGCGTCAGGTATTTATGGATTTCAATCGCAATCCTGAAGCGGTGC
CGGGTGACCTGCCGTTCTCATTAGATCGACTGGACGACGACGTTCGCGCGTATCTGGAAAATAACGACGCTCTGGCACCA
TCGCCCATCGAACGGCTGCAACGAATGAATCCGCTGTCTATCTCGCTGTATAAGATGCACGGTTACGATCTCACCACACA
GCCTTTGCAGTTTGCCATGAATAATCAGCATATGAATGGCTGCATTGAAGTGGATATCTGGGGACAAACCTCCCTGCCCG
GCTGTTTCGCCGTGGGGGAAGTTGCTGGCACACACGGCGTCACTCGCCCAGGTGGTGCAGCATTGAATGCCGGGCAGGTT
TTTGCTGTTCGTCTGGCACGTTTTATTGGTTGCACGCAAAAGCGGTCTGTTGAGGGTGATGTCGCGCAGCTGGTAGCCTC
ATCTCTGAATATAGTCAGAGAAGTTATCGCTCAGGCACTGGCAAACGAGAACGGAATGGCGCTGGTAACGGTGAAAGACA
AAATCCAGGCGCGAATGTCTGATTACGCCGGATTTATTTGTCATGCCGATAAAGTTCGTCATGCCACCCGTGACGCCCTG
CTGCTAAGTGAGTTTGTACAACAACACGGTTTAACCATCAATCACGCAGGCGAAATTGCCGAACTGTTTATGTGGCGGCA
TATGACGCTGACTTCTGCCGCCGTATTAACGCAATTGACGCATTATATTGACGCAGGTGGAGGCAGTCGTGGAGCACGGA
TGGTTATTGATCCACAAGGCAAATGCCTCCCACAAACTCGTCGCGGCGCAAAAGAAGAATGGCGTTTTCGCTCTGAACGT
GCTGAAGACAAAAATCACAGATTAACGATTCAATATTCGCAAGGTTCTTTTATTACCGAAGTGAAGTCTTTACGTATGCA
ACCGTGTATTAACGGTATTTACTTTGAAAAAAACTGGCCAGACTTTTTAGGTAATGCTGCCAACTTACTGATTTAG

Upstream 100 bases:

>100_bases
TGGAGATTGAGCGCGACATTCTGCCGTATATGGCTTTCCGTCCAATTATCAAGCACCCACGCCTGATGGAAAGTAGCCTG
TTTACGCCGATGGAGGATGC

Downstream 100 bases:

>100_bases
TGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGG
TGCGTAACGGCAAAAGCACT

Product: pyridine nucleotide-disulphide oxidoreductase

Products: NA

Alternate protein names: Succinate Dehydrogenase; Oxidoreductase Protein; Pyridine Nucleotide-Disulphide Oxidoreductase

Number of amino acids: Translated: 691; Mature: 690

Protein sequence:

>691_residues
MSQLDDTILDALTHVTFPKGFAQAEPAWVVTVDGVNYPLWQTDALVVGSGAARLRAAVELKRRQQNVLIATAGLYMGTSA
CSGSDKQTLFTAATAGNGDNFTKLAEALASGGAMDHDTAYVEAVGSLHTLGGLQYLGLELPEDRYGAILRYQTDHDEAGR
ATSCGPRTSRLMVKVLLEEVQRLAIPVLTSATVIKLLHQRDENGEDRVAGAILATGHRAHNPWGLAIVTAPNVVLATGGP
GELYRDSVYPHKCFGSLGLALEEGLTLTNLTESQFGIGTPRSTFPWNLSGTYVQVIPYIYSVDAEGNEYNFLADYYRTTQ
ELASNIFRKGYQWPFHATRVMDFGSSLLDMAVAQEQQSGRQVFMDFNRNPEAVPGDLPFSLDRLDDDVRAYLENNDALAP
SPIERLQRMNPLSISLYKMHGYDLTTQPLQFAMNNQHMNGCIEVDIWGQTSLPGCFAVGEVAGTHGVTRPGGAALNAGQV
FAVRLARFIGCTQKRSVEGDVAQLVASSLNIVREVIAQALANENGMALVTVKDKIQARMSDYAGFICHADKVRHATRDAL
LLSEFVQQHGLTINHAGEIAELFMWRHMTLTSAAVLTQLTHYIDAGGGSRGARMVIDPQGKCLPQTRRGAKEEWRFRSER
AEDKNHRLTIQYSQGSFITEVKSLRMQPCINGIYFEKNWPDFLGNAANLLI

Sequences:

>Translated_691_residues
MSQLDDTILDALTHVTFPKGFAQAEPAWVVTVDGVNYPLWQTDALVVGSGAARLRAAVELKRRQQNVLIATAGLYMGTSA
CSGSDKQTLFTAATAGNGDNFTKLAEALASGGAMDHDTAYVEAVGSLHTLGGLQYLGLELPEDRYGAILRYQTDHDEAGR
ATSCGPRTSRLMVKVLLEEVQRLAIPVLTSATVIKLLHQRDENGEDRVAGAILATGHRAHNPWGLAIVTAPNVVLATGGP
GELYRDSVYPHKCFGSLGLALEEGLTLTNLTESQFGIGTPRSTFPWNLSGTYVQVIPYIYSVDAEGNEYNFLADYYRTTQ
ELASNIFRKGYQWPFHATRVMDFGSSLLDMAVAQEQQSGRQVFMDFNRNPEAVPGDLPFSLDRLDDDVRAYLENNDALAP
SPIERLQRMNPLSISLYKMHGYDLTTQPLQFAMNNQHMNGCIEVDIWGQTSLPGCFAVGEVAGTHGVTRPGGAALNAGQV
FAVRLARFIGCTQKRSVEGDVAQLVASSLNIVREVIAQALANENGMALVTVKDKIQARMSDYAGFICHADKVRHATRDAL
LLSEFVQQHGLTINHAGEIAELFMWRHMTLTSAAVLTQLTHYIDAGGGSRGARMVIDPQGKCLPQTRRGAKEEWRFRSER
AEDKNHRLTIQYSQGSFITEVKSLRMQPCINGIYFEKNWPDFLGNAANLLI
>Mature_690_residues
SQLDDTILDALTHVTFPKGFAQAEPAWVVTVDGVNYPLWQTDALVVGSGAARLRAAVELKRRQQNVLIATAGLYMGTSAC
SGSDKQTLFTAATAGNGDNFTKLAEALASGGAMDHDTAYVEAVGSLHTLGGLQYLGLELPEDRYGAILRYQTDHDEAGRA
TSCGPRTSRLMVKVLLEEVQRLAIPVLTSATVIKLLHQRDENGEDRVAGAILATGHRAHNPWGLAIVTAPNVVLATGGPG
ELYRDSVYPHKCFGSLGLALEEGLTLTNLTESQFGIGTPRSTFPWNLSGTYVQVIPYIYSVDAEGNEYNFLADYYRTTQE
LASNIFRKGYQWPFHATRVMDFGSSLLDMAVAQEQQSGRQVFMDFNRNPEAVPGDLPFSLDRLDDDVRAYLENNDALAPS
PIERLQRMNPLSISLYKMHGYDLTTQPLQFAMNNQHMNGCIEVDIWGQTSLPGCFAVGEVAGTHGVTRPGGAALNAGQVF
AVRLARFIGCTQKRSVEGDVAQLVASSLNIVREVIAQALANENGMALVTVKDKIQARMSDYAGFICHADKVRHATRDALL
LSEFVQQHGLTINHAGEIAELFMWRHMTLTSAAVLTQLTHYIDAGGGSRGARMVIDPQGKCLPQTRRGAKEEWRFRSERA
EDKNHRLTIQYSQGSFITEVKSLRMQPCINGIYFEKNWPDFLGNAANLLI

Specific function: Unknown

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75703; Mature: 75571

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLDDTILDALTHVTFPKGFAQAEPAWVVTVDGVNYPLWQTDALVVGSGAARLRAAVEL
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHH
KRRQQNVLIATAGLYMGTSACSGSDKQTLFTAATAGNGDNFTKLAEALASGGAMDHDTAY
HHCCCCEEEEECCHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHH
VEAVGSLHTLGGLQYLGLELPEDRYGAILRYQTDHDEAGRATSCGPRTSRLMVKVLLEEV
HHHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
QRLAIPVLTSATVIKLLHQRDENGEDRVAGAILATGHRAHNPWGLAIVTAPNVVLATGGP
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCCCCCEEEEEECCCEEEEECCC
GELYRDSVYPHKCFGSLGLALEEGLTLTNLTESQFGIGTPRSTFPWNLSGTYVQVIPYIY
CHHHHCCCCCHHHHHHHCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
SVDAEGNEYNFLADYYRTTQELASNIFRKGYQWPFHATRVMDFGSSLLDMAVAQEQQSGR
EECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCC
QVFMDFNRNPEAVPGDLPFSLDRLDDDVRAYLENNDALAPSPIERLQRMNPLSISLYKMH
EEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEE
GYDLTTQPLQFAMNNQHMNGCIEVDIWGQTSLPGCFAVGEVAGTHGVTRPGGAALNAGQV
CCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCHH
FAVRLARFIGCTQKRSVEGDVAQLVASSLNIVREVIAQALANENGMALVTVKDKIQARMS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH
DYAGFICHADKVRHATRDALLLSEFVQQHGLTINHAGEIAELFMWRHMTLTSAAVLTQLT
HHCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHH
HYIDAGGGSRGARMVIDPQGKCLPQTRRGAKEEWRFRSERAEDKNHRLTIQYSQGSFITE
HHHHCCCCCCCCEEEECCCCCCCCHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHH
VKSLRMQPCINGIYFEKNWPDFLGNAANLLI
HHHHHHHHCCCCEEECCCCHHHHCCHHHHCC
>Mature Secondary Structure 
SQLDDTILDALTHVTFPKGFAQAEPAWVVTVDGVNYPLWQTDALVVGSGAARLRAAVEL
CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHH
KRRQQNVLIATAGLYMGTSACSGSDKQTLFTAATAGNGDNFTKLAEALASGGAMDHDTAY
HHCCCCEEEEECCHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHH
VEAVGSLHTLGGLQYLGLELPEDRYGAILRYQTDHDEAGRATSCGPRTSRLMVKVLLEEV
HHHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
QRLAIPVLTSATVIKLLHQRDENGEDRVAGAILATGHRAHNPWGLAIVTAPNVVLATGGP
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCCCCCEEEEEECCCEEEEECCC
GELYRDSVYPHKCFGSLGLALEEGLTLTNLTESQFGIGTPRSTFPWNLSGTYVQVIPYIY
CHHHHCCCCCHHHHHHHCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
SVDAEGNEYNFLADYYRTTQELASNIFRKGYQWPFHATRVMDFGSSLLDMAVAQEQQSGR
EECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCC
QVFMDFNRNPEAVPGDLPFSLDRLDDDVRAYLENNDALAPSPIERLQRMNPLSISLYKMH
EEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEEEE
GYDLTTQPLQFAMNNQHMNGCIEVDIWGQTSLPGCFAVGEVAGTHGVTRPGGAALNAGQV
CCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCHH
FAVRLARFIGCTQKRSVEGDVAQLVASSLNIVREVIAQALANENGMALVTVKDKIQARMS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH
DYAGFICHADKVRHATRDALLLSEFVQQHGLTINHAGEIAELFMWRHMTLTSAAVLTQLT
HHCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHH
HYIDAGGGSRGARMVIDPQGKCLPQTRRGAKEEWRFRSERAEDKNHRLTIQYSQGSFITE
HHHHCCCCCCCCEEEECCCCCCCCHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHH
VKSLRMQPCINGIYFEKNWPDFLGNAANLLI
HHHHHHHHCCCCEEECCCCHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA