| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is iraP [H]
Identifier: 187733120
GI number: 187733120
Start: 293549
End: 293809
Strand: Direct
Name: iraP [H]
Synonym: SbBS512_E0299
Alternate gene names: 187733120
Gene position: 293549-293809 (Clockwise)
Preceding gene: 187731940
Following gene: 187733634
Centisome position: 6.36
GC content: 44.44
Gene sequence:
>261_bases ATGAAAAATCTCATTGCTGAGTTGTTATTAAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGCGCGCAGGTAGA AGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCACAAAATGACCAACAGCGCTTGATTGAACAGGTGGATG GGGCTCTTTACGAGGTAAAGCCTGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCAATTATGTAAAGAAGTTA TTGAAGCATCCTCGTCAGTAA
Upstream 100 bases:
>100_bases GCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACG TTGGATAAGGAAATACAGAC
Downstream 100 bases:
>100_bases AAAGTTAATCTTTTCAACAGCTGTCATAAAGTTGTCACGGCCGAGACTTATAGTCGCTTTGTTTTTATTTTTTAATGTAT TTGTACATGGAGAAAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIEQVDGALYEVKPDASIPDDDTELLRNYVKKL LKHPRQ
Sequences:
>Translated_86_residues MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIEQVDGALYEVKPDASIPDDDTELLRNYVKKL LKHPRQ >Mature_86_residues MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIEQVDGALYEVKPDASIPDDDTELLRNYVKKL LKHPRQ
Specific function: Inhibits RpoS proteolysis by regulating RssB activity, thereby increasing the stability of the sigma stress factor RpoS especially during phosphate starvation, but also in stationary phase and during nitrogen starvation. Its effect on RpoS stability is du
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iraP family [H]
Homologues:
Organism=Escherichia coli, GI1786581, Length=86, Percent_Identity=95.3488372093023, Blast_Score=165, Evalue=7e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019732 [H]
Pfam domain/function: PF10796 Anti-adapt_IraP [H]
EC number: NA
Molecular weight: Translated: 9903; Mature: 9903
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIEQVDGALYEVK CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCC PDASIPDDDTELLRNYVKKLLKHPRQ CCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIEQVDGALYEVK CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCC PDASIPDDDTELLRNYVKKLLKHPRQ CCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA