Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is yuaK [H]

Identifier: 187732924

GI number: 187732924

Start: 1994741

End: 1995916

Strand: Reverse

Name: yuaK [H]

Synonym: SbBS512_E2196

Alternate gene names: 187732924

Gene position: 1995916-1994741 (Counterclockwise)

Preceding gene: 187733251

Following gene: 187733233

Centisome position: 43.24

GC content: 52.64

Gene sequence:

>1176_bases
GTGGTACGCCGTCTGCGTTTCTCCGGTCCTAAGACATCAATCATCTGTACTCCAATGACTAGTCTAAAAACTAGTATTAA
GACTATCACTTATTTAAGTGATACTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAATCAGTAAGTTGGAGTCATTACCCG
CCGACTGCCTGGAATTTATCTGGTCGTTACCCGAAAATTCTGTTGACCTGATAGTCACGGACCCGCCGTACTTTAAAGTG
AAGCCTGAGGGCTGGGATAACCAGTGGAAGGGCGACGATGATTACCTGAAGTGGCTGGACCAGTGTCTGGCGCAGTTCTG
GCGGGTGCTGAAACCTGCCGGAAGTCTTTACCTGTTCTGTGGTCATCGCCTGGCATCTGATATCGAAATCATGATGCGTG
AACGCTTCAGTGTGCTGAACCATATTATCTGGGCGAAGCCGTCCGGACGCTGGAACGGATGCAACAAGGAAAGCCTGCGG
GCGTATTTCCCCGCCACAGAGCGCATTCTGTTCGCGGAACATTATCAGGGGCCGTATCGTCCGAAAGATGCCGGGTATGC
GGCGAAGGGCAGTGCACTGAAACAGCATGTGATGGCCCCGCTGATTTCTTACTTTCGTGATGCGCGAGCTGCCCTGGGGA
TAACGGCAAAACAGATTGCAGATGCCACAGGAAAGAAAAACATGGTGTCGCACTGGTTCAGTGCCAGTCAGTGGCAGTTG
CCGAATGAAAGCGATTATCTGAAATTACAGGCGCTGTTTGCCCGGGTGGCAGAAGAGAAGCATCGGCGTGGTGAACTGGA
AAAGCTCCACCACCAGCTGGTGGATACGTATACCTCACTGAACCGGCAGTATGCGGAGCTGCTGAGTGAATATAAACATC
TGCGGCGGTATTTTGGCGTGACGGTGCAGGTGCCGTATACCGATGTGTGGACGCATAAACCGGTGCAGTTCTATCCCGGG
AAACATCCGTGCGAAAAACCGGCAGAAATGCTGCAGCAGATAATCAGCGCTGGCAGTCGTCCGGGTGACCTGATTGCAGA
TTTTTTCATGGGGTCGGGTTCGACAGTGAAAGCGGCACTGGCGCTCGGGCGTCGTGCAATTGGCGTTGAGCTGGAGACTG
AACGTTTTGAGCAGACGGTTCGGGAAGTACAGGATTTAGTCAGCCAGAACGGATGA

Upstream 100 bases:

>100_bases
GAGAAATAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAA
CAATTGCGATCTTTTCCTGT

Downstream 100 bases:

>100_bases
TATTGAAGAATTAATTACGAGTCGTTATTATGCGGCTCCCGGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATC
GCCAGGTCGCTGGTTCAAAT

Product: DNA methylase

Products: S-Adenosyl-L-Homocysteine; DNA 6-Methylaminopurine. [C]

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MVRRLRFSGPKTSIICTPMTSLKTSIKTITYLSDTGCLEIQGASLISKLESLPADCLEFIWSLPENSVDLIVTDPPYFKV
KPEGWDNQWKGDDDYLKWLDQCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLR
AYFPATERILFAEHYQGPYRPKDAGYAAKGSALKQHVMAPLISYFRDARAALGITAKQIADATGKKNMVSHWFSASQWQL
PNESDYLKLQALFARVAEEKHRRGELEKLHHQLVDTYTSLNRQYAELLSEYKHLRRYFGVTVQVPYTDVWTHKPVQFYPG
KHPCEKPAEMLQQIISAGSRPGDLIADFFMGSGSTVKAALALGRRAIGVELETERFEQTVREVQDLVSQNG

Sequences:

>Translated_391_residues
MVRRLRFSGPKTSIICTPMTSLKTSIKTITYLSDTGCLEIQGASLISKLESLPADCLEFIWSLPENSVDLIVTDPPYFKV
KPEGWDNQWKGDDDYLKWLDQCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLR
AYFPATERILFAEHYQGPYRPKDAGYAAKGSALKQHVMAPLISYFRDARAALGITAKQIADATGKKNMVSHWFSASQWQL
PNESDYLKLQALFARVAEEKHRRGELEKLHHQLVDTYTSLNRQYAELLSEYKHLRRYFGVTVQVPYTDVWTHKPVQFYPG
KHPCEKPAEMLQQIISAGSRPGDLIADFFMGSGSTVKAALALGRRAIGVELETERFEQTVREVQDLVSQNG
>Mature_391_residues
MVRRLRFSGPKTSIICTPMTSLKTSIKTITYLSDTGCLEIQGASLISKLESLPADCLEFIWSLPENSVDLIVTDPPYFKV
KPEGWDNQWKGDDDYLKWLDQCLAQFWRVLKPAGSLYLFCGHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLR
AYFPATERILFAEHYQGPYRPKDAGYAAKGSALKQHVMAPLISYFRDARAALGITAKQIADATGKKNMVSHWFSASQWQL
PNESDYLKLQALFARVAEEKHRRGELEKLHHQLVDTYTSLNRQYAELLSEYKHLRRYFGVTVQVPYTDVWTHKPVQFYPG
KHPCEKPAEMLQQIISAGSRPGDLIADFFMGSGSTVKAALALGRRAIGVELETERFEQTVREVQDLVSQNG

Specific function: Unknown

COG id: COG0863

COG function: function code L; DNA modification methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.72 [C]

Molecular weight: Translated: 44543; Mature: 44543

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRLRFSGPKTSIICTPMTSLKTSIKTITYLSDTGCLEIQGASLISKLESLPADCLEFI
CCCCEECCCCCCEEEECCHHHHHHHHHHHEEECCCCEEEECCHHHHHHHHHCCHHHHHHH
WSLPENSVDLIVTDPPYFKVKPEGWDNQWKGDDDYLKWLDQCLAQFWRVLKPAGSLYLFC
HHCCCCCCEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
GHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLRAYFPATERILFAEHYQGPYR
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHEEEHHHCCCCCC
PKDAGYAAKGSALKQHVMAPLISYFRDARAALGITAKQIADATGKKNMVSHWFSASQWQL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCC
PNESDYLKLQALFARVAEEKHRRGELEKLHHQLVDTYTSLNRQYAELLSEYKHLRRYFGV
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TVQVPYTDVWTHKPVQFYPGKHPCEKPAEMLQQIISAGSRPGDLIADFFMGSGSTVKAAL
EEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHH
ALGRRAIGVELETERFEQTVREVQDLVSQNG
HHCCHHHCCEECHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVRRLRFSGPKTSIICTPMTSLKTSIKTITYLSDTGCLEIQGASLISKLESLPADCLEFI
CCCCEECCCCCCEEEECCHHHHHHHHHHHEEECCCCEEEECCHHHHHHHHHCCHHHHHHH
WSLPENSVDLIVTDPPYFKVKPEGWDNQWKGDDDYLKWLDQCLAQFWRVLKPAGSLYLFC
HHCCCCCCEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
GHRLASDIEIMMRERFSVLNHIIWAKPSGRWNGCNKESLRAYFPATERILFAEHYQGPYR
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHEEEHHHCCCCCC
PKDAGYAAKGSALKQHVMAPLISYFRDARAALGITAKQIADATGKKNMVSHWFSASQWQL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCC
PNESDYLKLQALFARVAEEKHRRGELEKLHHQLVDTYTSLNRQYAELLSEYKHLRRYFGV
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TVQVPYTDVWTHKPVQFYPGKHPCEKPAEMLQQIISAGSRPGDLIADFFMGSGSTVKAAL
EEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHH
ALGRRAIGVELETERFEQTVREVQDLVSQNG
HHCCHHHCCEECHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; DNA Adenine; DNA [C]

Specific reaction: S-Adenosyl-L-Methionine + DNA Adenine = S-Adenosyl-L-Homocysteine + DNA 6-Methylaminopurine. Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA