| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187732896
Identifier: 187732896
GI number: 187732896
Start: 1182669
End: 1183202
Strand: Direct
Name: 187732896
Synonym: SbBS512_E1294
Alternate gene names: NA
Gene position: 1182669-1183202 (Clockwise)
Preceding gene: 187732332
Following gene: 187731365
Centisome position: 25.62
GC content: 51.69
Gene sequence:
>534_bases ATGGCGATAAAAGGGCTTGATCAGGCGATTGACAATCTGAGCCGGGTTCGTAAAAACGCCATTCCGGCGGCTTCAGCAAT GGCCATTAACCGCGTGGCCACAACGGTGATTAATCAGTCTTCATCACAGGTTGCCCGGGAGACAAAGGTTCGCCGGAAAC TGGTTAAGGAACGGTCCAGACTGAAACGGGCGACGGTCAGAAATCCGAATGCCAAAATTATCGTTAACCGCGGTGATCTC CCTGTGATTAAGCTGGGGATCAGGATGCTGGGGCGTCGCCCGAACAGCATACTTAAAGCCGGTCAGCATCGGTATCAGCG GGCATTTATTCAGCGATTAAAAAATGGTCGCTGGCATGTCATGCAGCGTGTGGCCGGGAAAAACCGTTACCCCATTGATG TGGTGAAAATCCCGATGGCGGCCCCACTGAAACAGGCATTTGATGAGAATGTTGACCGTATCCGGCGTGAACGCCTGCCT AAAGAACTGGCATACGCGCTGAAACAACAACTGAGGATTGCAATAAAACGATGA
Upstream 100 bases:
>100_bases GGATCGTGTTTCTCCGGATGACGGGGGCAGCTGTTATCTCTGGCTCAACCGTGGTCAACCACCCGCAGTTAACCGGCGAC GATAAACGCAGGGTGAAATT
Downstream 100 bases:
>100_bases AACACACTGACATTCGTGCCGCAGTGCTGGATGCGCTCGAGCAGCATGAACACGGGGCGACGCTGTTTGATGGTCGCCCC GTTGTTTTTGACGAAGAGGA
Product: prophage minor tail protein Z (GPZ)
Products: NA
Alternate protein names: Phage Tail Component; Prophage Minor Tail Protein Z; Tail Component Of Prophage; Prophage Minor Tail Z Family Protein; Bacteriophage Tail Protein; Minor Tail Protein Z Of Prophage; Gifsy-1 Prophagei VmtZ
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MAIKGLDQAIDNLSRVRKNAIPAASAMAINRVATTVINQSSSQVARETKVRRKLVKERSRLKRATVRNPNAKIIVNRGDL PVIKLGIRMLGRRPNSILKAGQHRYQRAFIQRLKNGRWHVMQRVAGKNRYPIDVVKIPMAAPLKQAFDENVDRIRRERLP KELAYALKQQLRIAIKR
Sequences:
>Translated_177_residues MAIKGLDQAIDNLSRVRKNAIPAASAMAINRVATTVINQSSSQVARETKVRRKLVKERSRLKRATVRNPNAKIIVNRGDL PVIKLGIRMLGRRPNSILKAGQHRYQRAFIQRLKNGRWHVMQRVAGKNRYPIDVVKIPMAAPLKQAFDENVDRIRRERLP KELAYALKQQLRIAIKR >Mature_176_residues AIKGLDQAIDNLSRVRKNAIPAASAMAINRVATTVINQSSSQVARETKVRRKLVKERSRLKRATVRNPNAKIIVNRGDLP VIKLGIRMLGRRPNSILKAGQHRYQRAFIQRLKNGRWHVMQRVAGKNRYPIDVVKIPMAAPLKQAFDENVDRIRRERLPK ELAYALKQQLRIAIKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20297; Mature: 20166
Theoretical pI: Translated: 12.39; Mature: 12.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKGLDQAIDNLSRVRKNAIPAASAMAINRVATTVINQSSSQVARETKVRRKLVKERSR CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LKRATVRNPNAKIIVNRGDLPVIKLGIRMLGRRPNSILKAGQHRYQRAFIQRLKNGRWHV HHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH MQRVAGKNRYPIDVVKIPMAAPLKQAFDENVDRIRRERLPKELAYALKQQLRIAIKR HHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AIKGLDQAIDNLSRVRKNAIPAASAMAINRVATTVINQSSSQVARETKVRRKLVKERSR CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LKRATVRNPNAKIIVNRGDLPVIKLGIRMLGRRPNSILKAGQHRYQRAFIQRLKNGRWHV HHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH MQRVAGKNRYPIDVVKIPMAAPLKQAFDENVDRIRRERLPKELAYALKQQLRIAIKR HHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA