| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187731365
Identifier: 187731365
GI number: 187731365
Start: 1183199
End: 1183594
Strand: Direct
Name: 187731365
Synonym: SbBS512_E1295
Alternate gene names: NA
Gene position: 1183199-1183594 (Clockwise)
Preceding gene: 187732896
Following gene: 187731994
Centisome position: 25.63
GC content: 52.78
Gene sequence:
>396_bases ATGAAACACACTGACATTCGTGCCGCAGTGCTGGATGCGCTCGAGCAGCATGAACACGGGGCGACGCTGTTTGATGGTCG CCCCGTTGTTTTTGACGAAGAGGATTTTCCTGCGATCGCGGTTTATCTGACGGATGCAGAGTATACCGGTGAAGAGCTGG ATGCAGATACCTGGCGGGCCACGCTGCATATTGAGGTGTTTTTACCGGCACAGGTACCGGATTCAGAGCTTGATCAGTGG ATGGAAAGCCGGATTTACCCGGCGATGACCGCGATCCCGGCACTGGCAGGACTGATTACCACGATGGTTACGCAGGGCTA TGAGTATCGTCGTGATGACGATATGGCGTTATGGAGTTCTGCAGATCTGACTTATTCCATTACATACGAGATGTGA
Upstream 100 bases:
>100_bases AACAGGCATTTGATGAGAATGTTGACCGTATCCGGCGTGAACGCCTGCCTAAAGAACTGGCATACGCGCTGAAACAACAA CTGAGGATTGCAATAAAACG
Downstream 100 bases:
>100_bases GGACGATATGGCAACACCAAATCCCCTTGAGCCGGTAAAAGGTGCCGGTACCACTCTGTGGGTTTACAACGGCAAGGGTG ATGCTTATGCAAACCCGTTG
Product: phage minor tail protein U
Products: NA
Alternate protein names: Phage Minor Tail Protein U; Tail Component Of Prophage; Gifsy-1 Prophage VmtU; Minor Tail U
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MKHTDIRAAVLDALEQHEHGATLFDGRPVVFDEEDFPAIAVYLTDAEYTGEELDADTWRATLHIEVFLPAQVPDSELDQW MESRIYPAMTAIPALAGLITTMVTQGYEYRRDDDMALWSSADLTYSITYEM
Sequences:
>Translated_131_residues MKHTDIRAAVLDALEQHEHGATLFDGRPVVFDEEDFPAIAVYLTDAEYTGEELDADTWRATLHIEVFLPAQVPDSELDQW MESRIYPAMTAIPALAGLITTMVTQGYEYRRDDDMALWSSADLTYSITYEM >Mature_131_residues MKHTDIRAAVLDALEQHEHGATLFDGRPVVFDEEDFPAIAVYLTDAEYTGEELDADTWRATLHIEVFLPAQVPDSELDQW MESRIYPAMTAIPALAGLITTMVTQGYEYRRDDDMALWSSADLTYSITYEM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14880; Mature: 14880
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHTDIRAAVLDALEQHEHGATLFDGRPVVFDEEDFPAIAVYLTDAEYTGEELDADTWRA CCCCHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCEEE TLHIEVFLPAQVPDSELDQWMESRIYPAMTAIPALAGLITTMVTQGYEYRRDDDMALWSS EEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC ADLTYSITYEM CCEEEEEEECC >Mature Secondary Structure MKHTDIRAAVLDALEQHEHGATLFDGRPVVFDEEDFPAIAVYLTDAEYTGEELDADTWRA CCCCHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCEEE TLHIEVFLPAQVPDSELDQWMESRIYPAMTAIPALAGLITTMVTQGYEYRRDDDMALWSS EEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC ADLTYSITYEM CCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA