| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is bcsE
Identifier: 187732428
GI number: 187732428
Start: 3729398
End: 3730534
Strand: Reverse
Name: bcsE
Synonym: SbBS512_E4000
Alternate gene names: 187732428
Gene position: 3730534-3729398 (Counterclockwise)
Preceding gene: 187733415
Following gene: 187734101
Centisome position: 80.82
GC content: 51.01
Gene sequence:
>1137_bases TTGGTAATTAATCCCGGAAATAATAACGATAAACAATTTTCATTGTTGCTTGAGGAATACCGTTCACTTTTTGGTCTTGC CAGTTTGCGTTTTCAGGGTGACCAACATTTGCTGGATATTGCCTTCTGGTGCAACGAAAAAGGGGTCAGCGCCCGTCAGC AGCTTAGCGTTCAGCAACAAAATGGTATCTGGACATTAGTTCAAAGCGAAGAGGCGGAGATCCAACCACGCAGCGACGAA AAACGCATTCTGAGTAATGTTGCTGTACTGGAAGGTGCGCCGCCGCTATCGGAACACTGGCAACTGTTCAACAATAACGA AGTCCTGTTCAATGAAGCCCGTACCGCTCAGGCGGCGACGGTGGTCTTTTCTTTACAGCAAAATGCGCAAATCGAGCCAC TGGCCCGCAGCATTCATACCCTGCGTCGCCAGCGCGGTAGTGCGATGAAAATCCTCGTGCGGGAAAATACCGCTAGCCTG CGCGCCACCGATGAACGTTTGTTATTGGCCTGCGGTGCAAATATGGTTATTCCGTGGAATGCGCCACTCTCCCGTTGTCT GACGATGATCGAAAGCGTGCAAGGGCAGAAGTTTAGTCGCTATGTGCCGGAAGATATCACTACCTTGCTGTCAATGACCC AGCCGCTCAAACTGCGTGGTTTCCAGAAGTGGGATGTGTTCTGTAATGCCGTCAACAACATGATGAATAACCCTCTATTA CCTGCCCACGGTAAAGGCGTTCTGGTTGCCCTACGTCCGGTACCGGGTATCCGCGTTGAACAAGCCCTGACGCTGTGTCG CCCTAACCGTACCGGCGATATCATGACCATTGGCGGTAATCGGCTGGTGCTGTTTCTCTCATTCTGTCGGATTAACGATC TGGATACCGCGTTGAATCATATTTTCCCATTGCCTACTGGCGACATTTTCTCAAACCGTATGGTCTGGTTTGAAGATGAT CAAATCAGTGCCGAGCTGGTGCAGATGCGCCTGCTTGCCCCAGAACAATGGGGCATGCCGCTGCCTTTAACGCAAAGTTC TAAACCGGTCATCAATGCCGAGCACGATGGTCGCCACTGGCGACGAATACCAGAACCCATGCGACTGTTAGATGATGCTG TGGAGCGCTCATCATGA
Upstream 100 bases:
>100_bases GAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACCTAAATGGAGCA GGTTAAACCATTGTTCGCTT
Downstream 100 bases:
>100_bases TGACCATCAGCGATATCATTGAAATTATTGTCGTTTGCGCACTGATATTTTTCCCGCTGGGCTATCTGGCGCGGCACTCT TTGCGACGCATTCGCGACAC
Product: cellulose biosynthesis protein BcsE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDE KRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASL RATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLL PAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDD QISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS
Sequences:
>Translated_378_residues MVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDE KRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASL RATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLL PAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDD QISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS >Mature_378_residues MVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDE KRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASL RATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLL PAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDD QISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789958, Length=378, Percent_Identity=99.7354497354497, Blast_Score=774, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017745 [H]
Pfam domain/function: PF10995 DUF2819 [H]
EC number: NA
Molecular weight: Translated: 42781; Mature: 42781
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQ CEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEECCCCCCHHHHHHHHHC NGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAAT CCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHEECCCEEEEECCCCHHHEE VVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANMVIPWN EEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCEEEEEECCCEEEECC APLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLL CHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCCCC PAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNH CCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEEEEHHHCCCHHHHHHH IFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHW CCCCCCCCHHCCCEEEEECCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEECCCCCCHH RRIPEPMRLLDDAVERSS HHCCHHHHHHHHHHHCCC >Mature Secondary Structure MVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQ CEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEECCCCCCHHHHHHHHHC NGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAAT CCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHEECCCEEEEECCCCHHHEE VVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANMVIPWN EEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCEEEEEECCCEEEECC APLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLL CHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCCCC PAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNH CCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCEEEEEEEHHHCCCHHHHHHH IFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHW CCCCCCCCHHCCCEEEEECCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCEEECCCCCCHH RRIPEPMRLLDDAVERSS HHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]