| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is srlB
Identifier: 187732253
GI number: 187732253
Start: 2965096
End: 2965467
Strand: Reverse
Name: srlB
Synonym: SbBS512_E3173
Alternate gene names: 187732253
Gene position: 2965467-2965096 (Counterclockwise)
Preceding gene: 187732690
Following gene: 187731541
Centisome position: 64.24
GC content: 55.11
Gene sequence:
>372_bases ATGACCGTTATTTATAAGACCACCATCACCCGTATCGGCGCGAGTGCCACTGACGCCCTCAGCGACCAGATGCTCATCAC CTTTCGTGAAGGCGCGCCAGCGGACCTCGAAGAGTATTGCTTCATTCATTGCCACGGCGAGTTGAAAGGTGCACTCCATC CCGGTTTGCAATTTACGCTCGGGCAGCATCGCTATCCGGTGACCGCTGTTGGCAGTGTGGCGGAAGACAACCTTCGCGAA CTGGGTCATGTCACCCTGCGCTTCGATGGTTTAAACGAAGCGGAATTTCCGGGCACTGTCCATGTGGCAGGCCCTGTACC CGACGATATCGCGCCGGGATCGGTTTTGAAGTTTGAATCTGTTAAGGAGTAA
Upstream 100 bases:
>100_bases GGTGTCCCTTCTGTACTGGTGAGCCGCTTTTTAACCGGCGCACCGACTGTACTGATCGCCTGGTTTGTCTCCGGTTTTAT CTATCAATAGAGGCTGAAAC
Downstream 100 bases:
>100_bases AAAATGAATCAGGTTGCCGTTGTCATCGGTGGTGGGCAAACCTTAGGCGCGTTCCTGTGCCACGGTCTGGTTGCCGAGGG GTATCGCGTCGCGGTTGTCG
Product: PTS system glucitol/sorbitol-specific transporter subunit IIA
Products: protein histidine; sugar phosphate
Alternate protein names: EIIA-Gut; EIII-Gut; PTS system glucitol/sorbitol-specific EIIA component [H]
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTVIYKTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHCHGELKGALHPGLQFTLGQHRYPVTAVGSVAEDNLRE LGHVTLRFDGLNEAEFPGTVHVAGPVPDDIAPGSVLKFESVKE
Sequences:
>Translated_123_residues MTVIYKTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHCHGELKGALHPGLQFTLGQHRYPVTAVGSVAEDNLRE LGHVTLRFDGLNEAEFPGTVHVAGPVPDDIAPGSVLKFESVKE >Mature_122_residues TVIYKTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHCHGELKGALHPGLQFTLGQHRYPVTAVGSVAEDNLREL GHVTLRFDGLNEAEFPGTVHVAGPVPDDIAPGSVLKFESVKE
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3731
COG function: function code G; Phosphotransferase system sorbitol-specific component IIA
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-5 domain [H]
Homologues:
Organism=Escherichia coli, GI1789056, Length=123, Percent_Identity=97.5609756097561, Blast_Score=249, Evalue=4e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004716 - InterPro: IPR018454 - ProDom: PD015842 [H]
Pfam domain/function: PF03829 PTSIIA_gutA [H]
EC number: 2.7.1.69
Molecular weight: Translated: 13306; Mature: 13175
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS51097 PTS_EIIA_TYPE_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIYKTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHCHGELKGALHPGLQFTL CEEEEEEEHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEE GQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHVAGPVPDDIAPGSVLKFES CCCCCCEEEECCCCHHHHHHCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEECCC VKE CCC >Mature Secondary Structure TVIYKTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHCHGELKGALHPGLQFTL EEEEEEEHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEE GQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHVAGPVPDDIAPGSVLKFES CCCCCCEEEECCCCHHHHHHCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEECCC VKE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Transferases; Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3553176; 1630305; 9205837; 9278503 [H]