| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187731987
Identifier: 187731987
GI number: 187731987
Start: 2794216
End: 2794446
Strand: Direct
Name: 187731987
Synonym: SbBS512_E2992
Alternate gene names: NA
Gene position: 2794216-2794446 (Clockwise)
Preceding gene: 187733212
Following gene: 187731886
Centisome position: 60.53
GC content: 46.32
Gene sequence:
>231_bases TTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAATGCTTTTGCCGTTACGCACCACGCCTTCAG TAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAA GTTGGCAGCATTACCAATACGTTGATAAACAATTCCGATGCCCGAAAAACGTCGGCGTTACTATTTCTTGA
Upstream 100 bases:
>100_bases CCATAATGCGTGCACTGGCACGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAG GCGGTGTAAGTGAACTGTAG
Downstream 100 bases:
>100_bases TGGCGATAATTTCAAATATATCAATGATACCTGGGGTCATGCGACGGGCGATAGGGTCTTGATTGAAATCGCAAAACGGT TAGCTGAATTTGGCGGGCTG
Product: putative IS1 encoded protein
Products: NA
Alternate protein names: Transposase; Glycosy Hydrolase Family; Outer Membrane Fimbrial User Protein; Allantoinase; Ankyrin-Repeat Protein A; Efflux Pump Component MtrF; Minor Fimbrial Subunit
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MPCFTAMRAEIALMSGNAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQYVDKQFRCPKNVGVTIS
Sequences:
>Translated_76_residues MPCFTAMRAEIALMSGNAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQYVDKQFRCPKNVGVTIS >Mature_75_residues PCFTAMRAEIALMSGNAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQYVDKQFRCPKNVGVTIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8213; Mature: 8082
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCFTAMRAEIALMSGNAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQY CCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH VDKQFRCPKNVGVTIS HHHHHCCCCCCCEEEC >Mature Secondary Structure PCFTAMRAEIALMSGNAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYQY CCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH VDKQFRCPKNVGVTIS HHHHHCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA