| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
Click here to switch to the map view.
The map label for this gene is malE
Identifier: 187731820
GI number: 187731820
Start: 1943662
End: 1944894
Strand: Reverse
Name: malE
Synonym: SbBS512_E2135
Alternate gene names: 187731820
Gene position: 1944894-1943662 (Counterclockwise)
Preceding gene: 187732717
Following gene: 187731503
Centisome position: 42.13
GC content: 40.31
Gene sequence:
>1233_bases ATGAAGCTTTCAAATATCGTCACAGTTATAATTCTTGCAATTTCCAGTACGCTAACACCCCAGGCGATGGCAGAAAAATT AATTCCTGAAACTGATGCTGAGTTGTTAGTTTGGTCTGATGCCACAAGCGTGGAATATATGAAATATGCAGCAAAGGAAT TCAATAAAGATTTTGGCTACAAGGTAAAGTTTACATTTCGCAATATAGCGCCAATGGATGCAGCATCAAGAATTATGCAG GATGGGGGTACGACTCGTGTAGCTGATGTAGCTGAAATTGAACATGATACCCTGGGGCGGTTAGTCGTTGCTGGCGGGGT TATGGAAAACATGGTCTCAGCTGAGCGGATTAAAAAAACATTTATTCCAGGCGCAGTATCGGCAGCTACATATAATAACA TCAGCTATGGTTTTCCTGTAAGTTTCGCAACGCTGGCGCTTTTCTATAATAAGGATTTGTTAAACACCGCACCAAAAACA TTCGAAGAAATCAATACTTTCAGTGAAAAGTTTAATAATTCATCCGAGCATAAATATGCTCTGCTATGGGATGTACAAAA TTATTATGTTTCACGTATGTTTATTACCTTGTATGGTGCCAACGAATTCGGTAAAATCGGTAACGATCCTAAAGCTCTAG GCATCGCTTCATCTGAAGCGAAGAAAGGGCTAGAGACGATGAAACGCTTAAAGAAAGCGAATCCCTCTAATCCTCTTGAT ATGGGTAATCCACAAGTTCTAAGAGGTCTGTTTAATGAAGGTAAAGTTGCTGCTGTAATCGACGGACCTTGGTCCATACA AGGTTACATTGACAGCGGAATCAATTTTGGCGTGACACGCATCCCAACATTAGATGGTCATCAGCCTCGCACATTTTCAA CAGTACGGCTGGCCGTTGTAAGCTCATTTACCGCATATCCTCATGCCGCTGAATTATTCGCTGACTACCTGACAACGGAT AAGATGTTGATGAAGCGTTATGAAATGACGAATCTCATCCCACCAATCGATTCACTTATGAACAAAATTAGCCAGACAGG TAGTGAAGCTATAAAAGCAATTATTGCTCAAGCTAATTATTCTGACGCAATGCCATCAATACCGGAAATGTCTTATTTAT GGTCTCCAATGACTAATGCTATTTTGGCTACCTGGGTTGAGAATAAAACACCGGATGAAGTTTTAAATCATGCACAAACA ATTATTGAAGAACAACTTTCGCTTCAGGAGTAA
Upstream 100 bases:
>100_bases TGACAGTTGATTGGCCTTGATTTGTGTTGATAATGGCGTGAATGCTTATGTAGTCGTACATCATATACTACTTAAAGATG TTATTCATGAGGTAAATATA
Downstream 100 bases:
>100_bases TTGTGAATACACAACAACTGAAAATGAAGAGTGCACCTGTGCTACCTATTTCCTGTTTGATTATGGGCGGGACTCAGTTA TCACGTCATTATTATGTGAA
Product: maltose/maltodextrin-binding periplasmic protein MalE
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MKLSNIVTVIILAISSTLTPQAMAEKLIPETDAELLVWSDATSVEYMKYAAKEFNKDFGYKVKFTFRNIAPMDAASRIMQ DGGTTRVADVAEIEHDTLGRLVVAGGVMENMVSAERIKKTFIPGAVSAATYNNISYGFPVSFATLALFYNKDLLNTAPKT FEEINTFSEKFNNSSEHKYALLWDVQNYYVSRMFITLYGANEFGKIGNDPKALGIASSEAKKGLETMKRLKKANPSNPLD MGNPQVLRGLFNEGKVAAVIDGPWSIQGYIDSGINFGVTRIPTLDGHQPRTFSTVRLAVVSSFTAYPHAAELFADYLTTD KMLMKRYEMTNLIPPIDSLMNKISQTGSEAIKAIIAQANYSDAMPSIPEMSYLWSPMTNAILATWVENKTPDEVLNHAQT IIEEQLSLQE
Sequences:
>Translated_410_residues MKLSNIVTVIILAISSTLTPQAMAEKLIPETDAELLVWSDATSVEYMKYAAKEFNKDFGYKVKFTFRNIAPMDAASRIMQ DGGTTRVADVAEIEHDTLGRLVVAGGVMENMVSAERIKKTFIPGAVSAATYNNISYGFPVSFATLALFYNKDLLNTAPKT FEEINTFSEKFNNSSEHKYALLWDVQNYYVSRMFITLYGANEFGKIGNDPKALGIASSEAKKGLETMKRLKKANPSNPLD MGNPQVLRGLFNEGKVAAVIDGPWSIQGYIDSGINFGVTRIPTLDGHQPRTFSTVRLAVVSSFTAYPHAAELFADYLTTD KMLMKRYEMTNLIPPIDSLMNKISQTGSEAIKAIIAQANYSDAMPSIPEMSYLWSPMTNAILATWVENKTPDEVLNHAQT IIEEQLSLQE >Mature_410_residues MKLSNIVTVIILAISSTLTPQAMAEKLIPETDAELLVWSDATSVEYMKYAAKEFNKDFGYKVKFTFRNIAPMDAASRIMQ DGGTTRVADVAEIEHDTLGRLVVAGGVMENMVSAERIKKTFIPGAVSAATYNNISYGFPVSFATLALFYNKDLLNTAPKT FEEINTFSEKFNNSSEHKYALLWDVQNYYVSRMFITLYGANEFGKIGNDPKALGIASSEAKKGLETMKRLKKANPSNPLD MGNPQVLRGLFNEGKVAAVIDGPWSIQGYIDSGINFGVTRIPTLDGHQPRTFSTVRLAVVSSFTAYPHAAELFADYLTTD KMLMKRYEMTNLIPPIDSLMNKISQTGSEAIKAIIAQANYSDAMPSIPEMSYLWSPMTNAILATWVENKTPDEVLNHAQT IIEEQLSLQE
Specific function: Binding protein for cyclodextrin; involved in its cellular uptake. Interacts with all natural cyclodextrins:alpha, beta and gamma [H]
COG id: COG2182
COG function: function code G; Maltose-binding periplasmic proteins/domains
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790466, Length=403, Percent_Identity=28.287841191067, Blast_Score=124, Evalue=1e-29,
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006060 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 45403; Mature: 45403
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSNIVTVIILAISSTLTPQAMAEKLIPETDAELLVWSDATSVEYMKYAAKEFNKDFGY CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCE KVKFTFRNIAPMDAASRIMQDGGTTRVADVAEIEHDTLGRLVVAGGVMENMVSAERIKKT EEEEEECCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIPGAVSAATYNNISYGFPVSFATLALFYNKDLLNTAPKTFEEINTFSEKFNNSSEHKYA HCCCCCHHHEECCCCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHCCCCCCEEE LLWDVQNYYVSRMFITLYGANEFGKIGNDPKALGIASSEAKKGLETMKRLKKANPSNPLD EEEEHHHHHHHHHEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC MGNPQVLRGLFNEGKVAAVIDGPWSIQGYIDSGINFGVTRIPTLDGHQPRTFSTVRLAVV CCCHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHH SSFTAYPHAAELFADYLTTDKMLMKRYEMTNLIPPIDSLMNKISQTGSEAIKAIIAQANY HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC SDAMPSIPEMSYLWSPMTNAILATWVENKTPDEVLNHAQTIIEEQLSLQE CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLSNIVTVIILAISSTLTPQAMAEKLIPETDAELLVWSDATSVEYMKYAAKEFNKDFGY CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCE KVKFTFRNIAPMDAASRIMQDGGTTRVADVAEIEHDTLGRLVVAGGVMENMVSAERIKKT EEEEEECCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIPGAVSAATYNNISYGFPVSFATLALFYNKDLLNTAPKTFEEINTFSEKFNNSSEHKYA HCCCCCHHHEECCCCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHCCCCCCEEE LLWDVQNYYVSRMFITLYGANEFGKIGNDPKALGIASSEAKKGLETMKRLKKANPSNPLD EEEEHHHHHHHHHEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC MGNPQVLRGLFNEGKVAAVIDGPWSIQGYIDSGINFGVTRIPTLDGHQPRTFSTVRLAVV CCCHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHH SSFTAYPHAAELFADYLTTDKMLMKRYEMTNLIPPIDSLMNKISQTGSEAIKAIIAQANY HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC SDAMPSIPEMSYLWSPMTNAILATWVENKTPDEVLNHAQTIIEEQLSLQE CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]