| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is acpT
Identifier: 187731194
GI number: 187731194
Start: 3573849
End: 3574418
Strand: Reverse
Name: acpT
Synonym: SbBS512_E3847
Alternate gene names: 187731194
Gene position: 3574418-3573849 (Counterclockwise)
Preceding gene: 187730420
Following gene: 187733742
Centisome position: 77.44
GC content: 56.32
Gene sequence:
>570_bases ATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCACCGGGTTTACGCGAGCAAGCACCGCA AGGTCCACGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGCTACCGGAGATCATCTATG GCGAACAAGGCAAACCTGCATTCGCGCCGGAAACGCCGCTATGGTTCAACTTAAGCCATAGCGGTGACGATATCGCTCTG CTGTTGAGCGATGAAGGCGAAGTCGGCTGCGATATCGAAGTGATTCGCCCGCGCGCCAACTGGCGCTGGCTGGCGAACGC CGTGTTCAGCCTCGGGGAACACGCTGAAATGGACGCCGTGCATCCTGATCAGCAACTGGAAATGTTCTGGCGCATCTGGA CGCGCAAAGAAGCCATCGTTAAACAGCGTGGCGGCAGCGCCTGGCAAATCGTCAGCGTAGATAGCACCTATCACTCCTCG CTGTCAGTCAGCCATTGTCAGCTAGAAAATTTAAGCCTTGCGATCTGCACCCCCGTTACTTTATTCGTACCCCTTATAAT GGGGTGTTAG
Upstream 100 bases:
>100_bases GATTTTACTGGGGCCAGGCAGACCGAAAAGTCGGTTACCGGGATGAGGCGACAAGTGATACGATACGCACTTTCATTTTC CATTAAACGTTGGCCCTGAT
Downstream 100 bases:
>100_bases CCAGCCAGACCCGGCATGATTACTGCCCCCAGTCGTCCATGATCCGGGGGGGGATGTCACCGGGTCTGGTGGGGCGCTGG TAACCGCTAATAGGGGTCAG
Product: holo-(acyl carrier protein) synthase 2
Products: adenosine 3',5'-bisphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHTLSPLPEIIYGEQGKPAFAPETPLWFNLSHSGDDIAL LLSDEGEVGCDIEVIRPRANWRWLANAVFSLGEHAEMDAVHPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSS LSVSHCQLENLSLAICTPVTLFVPLIMGC
Sequences:
>Translated_189_residues MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHTLSPLPEIIYGEQGKPAFAPETPLWFNLSHSGDDIAL LLSDEGEVGCDIEVIRPRANWRWLANAVFSLGEHAEMDAVHPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSS LSVSHCQLENLSLAICTPVTLFVPLIMGC >Mature_189_residues MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHTLSPLPEIIYGEQGKPAFAPETPLWFNLSHSGDDIAL LLSDEGEVGCDIEVIRPRANWRWLANAVFSLGEHAEMDAVHPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSS LSVSHCQLENLSLAICTPVTLFVPLIMGC
Specific function: May be involved in an alternative pathway for phosphopantetheinyl transfer and holo-ACP synthesis in E.coli. The native apo-protein substrate is unknown. Is able to functionally replace AcpS in vivo but only when expressed at high levels [H]
COG id: COG2091
COG function: function code H; Phosphopantetheinyl transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. Gsp/sfp/hetI/acpT family [H]
Homologues:
Organism=Escherichia coli, GI1789886, Length=179, Percent_Identity=98.8826815642458, Blast_Score=364, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008278 [H]
Pfam domain/function: PF01648 ACPS [H]
EC number: NA
Molecular weight: Translated: 21036; Mature: 21036
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHTLSPLPEIIYGEQGKPA CEEEEEECCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC FAPETPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWRWLANAVFSLGEHAEMDAV CCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCC HPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSSLSVSHCQLENLSLAICTPVT CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEECCCCEEEEHHHHH LFVPLIMGC HHHHHHHCC >Mature Secondary Structure MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHTLSPLPEIIYGEQGKPA CEEEEEECCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC FAPETPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWRWLANAVFSLGEHAEMDAV CCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCC HPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSSLSVSHCQLENLSLAICTPVT CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEECCCCEEEEHHHHH LFVPLIMGC HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Coenzyme A; apo-[acyl carrier protein] [C]
Specific reaction: Coenzyme A + apo-[acyl carrier protein] = adenosine 3',5'-bisphosphate + [acyl carrier protein] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]