| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is fiu [H]
Identifier: 187730962
GI number: 187730962
Start: 2346631
End: 2346963
Strand: Direct
Name: fiu [H]
Synonym: SbBS512_E2545
Alternate gene names: 187730962
Gene position: 2346631-2346963 (Clockwise)
Preceding gene: 187730464
Following gene: 187731531
Centisome position: 50.84
GC content: 52.55
Gene sequence:
>333_bases ATGGAAAACAATCGCAATTTCCCTGCCAGACAATTTCATTCGCTCACGTTCTTTGCCGGTCTTTGTATTGGCATCACGCC TGTGGCTCAGGCACTCGCCGCCGAAGGGCAAACTAACGCGGATGACACGCTGGTTGTCGAAGCATCAACGCCTTCGCTTT ATGCGCCACAACAATCTGCCGATCCGAAATTCTCGCGTCCGGTAGCGGATACTACCCGCACGATGACGGTGATTTCTGAA CAAGTGATTAAAGATCAGGGCGCAACCAACCTTACCGACGCGCTCAAAAACGTCCCCGGCGTGGGTAATGCCGATCAGTT AAGGATCAGTTGA
Upstream 100 bases:
>100_bases GCACGAACACTATCACGGGATTAACAGTGGCATCGCATCCGCAGAGATGCTTTCTCGTGGCAGTGAAAATTTCAACATAT AAGAAAAAGTCACCTGCAAA
Downstream 100 bases:
>100_bases CCGATCCAGTGGCTGTGTAAGAATCCGGAAACGCTCACTTGTTTCCGGATTTTTTTATGCACATTGGACAGGCTCTTGAT CTGGTATCCCGTTACGATTC
Product: catecholate siderophore receptor fiu
Products: NA
Alternate protein names: Ferric iron uptake protein; TonB-dependent receptor fiu [H]
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISE QVIKDQGATNLTDALKNVPGVGNADQLRIS
Sequences:
>Translated_110_residues MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISE QVIKDQGATNLTDALKNVPGVGNADQLRIS >Mature_110_residues MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISE QVIKDQGATNLTDALKNVPGVGNADQLRIS
Specific function: Involved in the active transport across the outer membrane of iron complexed with catecholate siderophores such as dihydroxybenzoylserine and dihydroxybenzoate. It derives its energy for transport by interacting with the trans-periplasmic membrane protein
COG id: COG4774
COG function: function code P; Outer membrane receptor for monomeric catechols
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787024, Length=102, Percent_Identity=100, Blast_Score=213, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 11734; Mature: 11734
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPQQSA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC DPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGNADQLRIS CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEC >Mature Secondary Structure MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPQQSA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC DPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGNADQLRIS CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]