Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is ycjM [H]

Identifier: 187730931

GI number: 187730931

Start: 1411640

End: 1411783

Strand: Direct

Name: ycjM [H]

Synonym: SbBS512_E1545

Alternate gene names: 187730931

Gene position: 1411640-1411783 (Clockwise)

Preceding gene: 187733036

Following gene: 187730331

Centisome position: 30.58

GC content: 41.67

Gene sequence:

>144_bases
ATGGGATCGCTACCACTGAAAGGCAACATGAAACAGAAAATTACTGATTACCTGGACGAAATCTACGGTGGAACATTTAC
CGCAACTCATTTACAGAAACTTGTAACGCGTCTTGAGGGTAATGCTGCCAACTTACTGATTTAG

Upstream 100 bases:

>100_bases
CACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACTCTTGTGCTCAATTGACAGTTTATTTTCT
GCGGAGTAGTCTCTCGTTTC

Downstream 100 bases:

>100_bases
TGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGG
TGCGTAACGGCAAAAGCACT

Product: putative sucrose phosphorylase

Products: NA

Alternate protein names: Sucrose glucosyltransferase [H]

Number of amino acids: Translated: 47; Mature: 46

Protein sequence:

>47_residues
MGSLPLKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLEGNAANLLI

Sequences:

>Translated_47_residues
MGSLPLKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLEGNAANLLI
>Mature_46_residues
GSLPLKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLEGNAANLLI

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sucrose phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI87081873, Length=30, Percent_Identity=100, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR016377 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =2.4.1.7 [H]

Molecular weight: Translated: 5179; Mature: 5048

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLPLKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLEGNAANLLI
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GSLPLKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLEGNAANLLI
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]