| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is hisIE
Identifier: 187730879
GI number: 187730879
Start: 1114248
End: 1114859
Strand: Reverse
Name: hisIE
Synonym: SbBS512_E1206
Alternate gene names: 187730879
Gene position: 1114859-1114248 (Counterclockwise)
Preceding gene: 187731617
Following gene: 187732343
Centisome position: 24.15
GC content: 53.1
Gene sequence:
>612_bases ATGTTAACAGAACAACAACGTCGCGAACTGGACTGGGAAAAAACCGACGGACTTATGCCGGTGATTGTGCAACACGCGGT ATCCGGTGAAGTGTTAATGCTGGGCTATATGAACCCGCAAGCTCTGGACAAAACCATCGAAAGCGGCAAAGTCACCTTCT TCTCGCGCACTAAACAGCGACTGTGGACCAAAGGCGAAACGTCGGGCAATTTCCTCAACGTAGTAAATATTACGCCGGAC TGCGACAACGACACGTTACTGTTGCTGGCGAATCCCATCGGCCCGACCTGCCACAAAGGCACCAGCAGCTGCTTCGGCGA CACCGCTCACCAGTGGCTGTTCCTGTATCAACTGGAACAACTGCTCGCCGAACGTAAATCTGCCGACCCGGAAACCTCCT ACACCGCCAAACTGTATGCCAGCGGCACCAAGCGCATTGCGCAGAAAGTGGGCGAAGAAGGCGTGGAAACCGCACTGGCA GCAACGGTGCATGACCGCTTTGAACTGACCAACGAAGCATCTGACTTGATGTATCACTTGCTAGTGCTGTTGCAGGATCA GGATCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGA
Upstream 100 bases:
>100_bases ACGTTGACGGCGCGCTGGCAGCTTCCGTATTCCACAAACAAATAATCAATATTGGTGAATTAAAAGCGTACCTGGCAACA CAGGGCGTGGAGATCAGGAT
Downstream 100 bases:
>100_bases GTTGCGGGGTAAGCGGATGCAATGTTGTTGTCGCATCCGGCAAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTC TTTAAAACCGAAAAGATTAC
Product: bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein
Products: NA
Alternate protein names: Phosphoribosyl-AMP cyclohydrolase; PRA-CH; Phosphoribosyl-ATP pyrophosphatase; PRA-PH [H]
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPQALDKTIESGKVTFFSRTKQRLWTKGETSGNFLNVVNITPD CDNDTLLLLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALA ATVHDRFELTNEASDLMYHLLVLLQDQDLDLTTVIENLRKRHQ
Sequences:
>Translated_203_residues MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPQALDKTIESGKVTFFSRTKQRLWTKGETSGNFLNVVNITPD CDNDTLLLLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALA ATVHDRFELTNEASDLMYHLLVLLQDQDLDLTTVIENLRKRHQ >Mature_203_residues MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPQALDKTIESGKVTFFSRTKQRLWTKGETSGNFLNVVNITPD CDNDTLLLLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALA ATVHDRFELTNEASDLMYHLLVLLQDQDLDLTTVIENLRKRHQ
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PRA-PH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=203, Percent_Identity=97.0443349753695, Blast_Score=413, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6319819, Length=204, Percent_Identity=34.8039215686275, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023019 - InterPro: IPR008179 - InterPro: IPR021130 - InterPro: IPR002496 - ProDom: PD002610 [H]
Pfam domain/function: PF01502 PRA-CH; PF01503 PRA-PH [H]
EC number: =3.5.4.19; =3.6.1.31 [H]
Molecular weight: Translated: 22884; Mature: 22884
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPQALDKTIESGKVTFFSRTKQR CCCHHHHHCCCCHHCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCEEEHHHHHHH LWTKGETSGNFLNVVNITPDCDNDTLLLLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQ HHCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHCHHHHHHHHHHHHHH LLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHL HHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LVLLQDQDLDLTTVIENLRKRHQ HHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPQALDKTIESGKVTFFSRTKQR CCCHHHHHCCCCHHCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCEEEHHHHHHH LWTKGETSGNFLNVVNITPDCDNDTLLLLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQ HHCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHCHHHHHHHHHHHHHH LLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHL HHHHHHCCCCCCCCEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LVLLQDQDLDLTTVIENLRKRHQ HHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10222209; 11206551; 11258796 [H]