| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is dicA [C]
Identifier: 187730851
GI number: 187730851
Start: 1146568
End: 1146897
Strand: Reverse
Name: dicA [C]
Synonym: SbBS512_E1248
Alternate gene names: 187730851
Gene position: 1146897-1146568 (Counterclockwise)
Preceding gene: 187733300
Following gene: 187731572
Centisome position: 24.85
GC content: 49.09
Gene sequence:
>330_bases ATGCTTTTACAGAACAAAAATTCTGCAATCAACAACCGTCTTCGCACCCAACGCGAAGCCTGCGGCTTAACAACCGCCGA ACTCGCCAGGCTGCTCGATCTCGATGAAGAAATTATCATCCAGTGGGAGAGCGGAGAGTATGAACCAACTATCAGTATGC TTATCCCACTGGCAAATATTCTTGGCTGCGATCCGATGTGGCTGTTAACTGGTGAGGTTACTCCTCCGGAGCAACCAAAA AGTGAGGAGCAGCAACACCATGACGCATCTCAACAAGTTTGCCCCTTATCTCGCGAAGCTCTTCTGCGGAAGAACCAATA CCAATGGTGA
Upstream 100 bases:
>100_bases AAAAGCAACACCTGATGCTACACTCTCTAGCGATATAGAGTCATGCGCAGGACTGGCATGGGATATGACAAATAGCATAT CCAGAAAGCTATCGTCAGCA
Downstream 100 bases:
>100_bases CATAATCGCCGCTTCGCCCTTCAAGGTACATGCGAACATTTTTATCAATCATTGCGGAAACAGTCTCAATATGAAAACAC TTCTGAGACTCGCTATATAG
Product: helix-turn-helix domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MLLQNKNSAINNRLRTQREACGLTTAELARLLDLDEEIIIQWESGEYEPTISMLIPLANILGCDPMWLLTGEVTPPEQPK SEEQQHHDASQQVCPLSREALLRKNQYQW
Sequences:
>Translated_109_residues MLLQNKNSAINNRLRTQREACGLTTAELARLLDLDEEIIIQWESGEYEPTISMLIPLANILGCDPMWLLTGEVTPPEQPK SEEQQHHDASQQVCPLSREALLRKNQYQW >Mature_109_residues MLLQNKNSAINNRLRTQREACGLTTAELARLLDLDEEIIIQWESGEYEPTISMLIPLANILGCDPMWLLTGEVTPPEQPK SEEQQHHDASQQVCPLSREALLRKNQYQW
Specific function: This Protein Is A Repressor Of Division Inhibition Gene Dicb. [C]
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12513; Mature: 12513
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLQNKNSAINNRLRTQREACGLTTAELARLLDLDEEIIIQWESGEYEPTISMLIPLANI CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHEEEECCCCCCCHHHHHHHHHHH LGCDPMWLLTGEVTPPEQPKSEEQQHHDASQQVCPLSREALLRKNQYQW HCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCC >Mature Secondary Structure MLLQNKNSAINNRLRTQREACGLTTAELARLLDLDEEIIIQWESGEYEPTISMLIPLANI CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHEEEECCCCCCCHHHHHHHHHHH LGCDPMWLLTGEVTPPEQPKSEEQQHHDASQQVCPLSREALLRKNQYQW HCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA