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The map label for this gene is chaC [H]

Identifier: 187730621

GI number: 187730621

Start: 1262028

End: 1262744

Strand: Direct

Name: chaC [H]

Synonym: SbBS512_E1385

Alternate gene names: 187730621

Gene position: 1262028-1262744 (Clockwise)

Preceding gene: 187731612

Following gene: 187730867

Centisome position: 27.34

GC content: 55.09

Gene sequence:

>717_bases
ATGCAGTGGCGGAGGTGTAAGGTGATAACGCGTGATTTCTTGATGAATGCCGATTGTAAAACGGCATTTGGTGCCATTGA
AGAATCACTCTTATGGTCAGCAGAGCAACGAGCGGCTTCGCTGGCGGCGACGCTGGCTTGTCGACCTGATGAGGGACCGG
TGTGGATCTTCGGTTATGGATCGTTGATGTGGAATCCGGCACTGGAGTTTACCGAGTCGTGCACCGGTACACTGGTTGGA
TGGCATCGCGCGTTTTGCCTGCGCCTGACCGCCGGGCGCGGGACTGCGCACCAGCCGGGACGGATGCTTGCACTGAAAGA
GGGCGGACGCACTACAGGCGTCGCCTATCGACTGCCAGAAGAGACGCTGGAGCAGGAACTAACCCTGTTGTGGAAGCGCG
AGATGATTACCGGCTGTTATCTGCCAACCTGGTGTCAGCTTGATCTTGATGATGGATGCACAGTAAACGCCATTGTGTTT
ATTATGGACCCGCGACATCCAGAATATGAATCTGACACTCGCGCTCAGGTCATCGCGCCGTTGATTGCGGCGGCGAGCGG
TCCGCTGGGAACCAACGCACAATACCTGTTTTCACTGGAACAGGAGCTTATCAAACTGGGAATGCAGGACGATGGGCTGA
ATGATTTGCTGGTATCGGTAAAAAAACTGCTGGCGGAGAATTATCCGGATGGTGTGTTACGGCCGGGATTCGCCTGA

Upstream 100 bases:

>100_bases
GCCTTGCAAGTGGTCCGTGGATTGCATATTGTCCCGTTAGTGGTTTCAAAATGAGCAGTAAAAATGTCCGGAAGACACCA
AAAAGTTGTCGCAGGGAAGT

Downstream 100 bases:

>100_bases
GTAAACTTCCCGCATAGTGGGGCGTCAGACGCCCCCTCAAACATTAAAATGTGAGCACTTTATCGGCTGACAGCGTCCAT
TGCGCCAGTTCCACAAGAGT

Product: chaC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MQWRRCKVITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESCTGTLVG
WHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGCTVNAIVF
IMDPRHPEYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENYPDGVLRPGFA

Sequences:

>Translated_238_residues
MQWRRCKVITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESCTGTLVG
WHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGCTVNAIVF
IMDPRHPEYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENYPDGVLRPGFA
>Mature_238_residues
MQWRRCKVITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESCTGTLVG
WHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGCTVNAIVF
IMDPRHPEYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENYPDGVLRPGFA

Specific function: Unknown

COG id: COG3703

COG function: function code P; Uncharacterized protein involved in cation transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chaC family [H]

Homologues:

Organism=Homo sapiens, GI218563698, Length=182, Percent_Identity=32.967032967033, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI56790287, Length=177, Percent_Identity=31.638418079096, Blast_Score=76, Evalue=3e-14,
Organism=Escherichia coli, GI145693119, Length=231, Percent_Identity=98.7012987012987, Blast_Score=468, Evalue=1e-133,
Organism=Caenorhabditis elegans, GI17560078, Length=187, Percent_Identity=29.4117647058824, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24641578, Length=185, Percent_Identity=30.8108108108108, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45553467, Length=211, Percent_Identity=30.3317535545024, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24649389, Length=211, Percent_Identity=30.3317535545024, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24649391, Length=211, Percent_Identity=30.3317535545024, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24649393, Length=211, Percent_Identity=30.3317535545024, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013024
- InterPro:   IPR006840 [H]

Pfam domain/function: PF04752 ChaC [H]

EC number: NA

Molecular weight: Translated: 26433; Mature: 26433

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWRRCKVITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYG
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEC
SLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPE
CCCCCCHHHHHHCCCHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEECCH
ETLEQELTLLWKREMITGCYLPTWCQLDLDDGCTVNAIVFIMDPRHPEYESDTRAQVIAP
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHH
LIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENYPDGVLRPGFA
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQWRRCKVITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYG
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEC
SLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPE
CCCCCCHHHHHHCCCHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEECCH
ETLEQELTLLWKREMITGCYLPTWCQLDLDDGCTVNAIVFIMDPRHPEYESDTRAQVIAP
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHH
LIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENYPDGVLRPGFA
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]