Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477829

Identifier: 186477829

GI number: 186477829

Start: 3463593

End: 3464069

Strand: Reverse

Name: 186477829

Synonym: Bphy_3085

Alternate gene names: NA

Gene position: 3464069-3463593 (Counterclockwise)

Preceding gene: 186477830

Following gene: 186477828

Centisome position: 99.57

GC content: 63.94

Gene sequence:

>477_bases
ATGAACAAAAATCTGATCGCCGCGCTTTGCGTGGTGGCCGCCGGCTGCACGACGCGAGGCCAGGTCAATCCCGACGTGAT
GCAGATCGCCACGGCGCCGCTGACATGCACCAGCAAGAGTCAATGCGATGCCTGGTGGGCGCGCGCGCATACATGGGTCA
CCACACATTCCCGTTATGAAGTCTCGACCTCGACCGATACGCTGATCCAGACGGCCGGCCCGGACGGCGGCAAGCGCGAT
CTTTCGTTCGAAATCACGAAGGCGCCGAATAACGACGGCACGTCGACGATCGGCTTCGCTGCGCATTGCGACAGTTCGCT
CGGCTGCAAGCCGAACCCGTGGGAAGCGGGCGCCGACTTCAAGGCGTTCGTGCGTAGCAGTTCGGCGAGCGTGGCGACGC
CATCGCCATCCGGTCAGGCGGCGGGCTCAGGCGGACAATCGACAGCATCGCCTACGGGCGAACCCGTGTCGCAATAG

Upstream 100 bases:

>100_bases
CTTCGTGCGCGGGGGATGAAACGCCCCCGCGACGCCGCGGTCCAACCCTGTATAACGCAGCGCTTTGCCGCTGGGACAGA
TGCCAGGGAGGAAACAGGTT

Downstream 100 bases:

>100_bases
GAGGAACCCGAGCCGCCAGAACCTTTTTTGAGACTTCTCTGATTGGCGCCGAGACACGCACTCACTATCGTCTCTCCACC
CCCAATCTAATCTGCGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MNKNLIAALCVVAAGCTTRGQVNPDVMQIATAPLTCTSKSQCDAWWARAHTWVTTHSRYEVSTSTDTLIQTAGPDGGKRD
LSFEITKAPNNDGTSTIGFAAHCDSSLGCKPNPWEAGADFKAFVRSSSASVATPSPSGQAAGSGGQSTASPTGEPVSQ

Sequences:

>Translated_158_residues
MNKNLIAALCVVAAGCTTRGQVNPDVMQIATAPLTCTSKSQCDAWWARAHTWVTTHSRYEVSTSTDTLIQTAGPDGGKRD
LSFEITKAPNNDGTSTIGFAAHCDSSLGCKPNPWEAGADFKAFVRSSSASVATPSPSGQAAGSGGQSTASPTGEPVSQ
>Mature_158_residues
MNKNLIAALCVVAAGCTTRGQVNPDVMQIATAPLTCTSKSQCDAWWARAHTWVTTHSRYEVSTSTDTLIQTAGPDGGKRD
LSFEITKAPNNDGTSTIGFAAHCDSSLGCKPNPWEAGADFKAFVRSSSASVATPSPSGQAAGSGGQSTASPTGEPVSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16250; Mature: 16250

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNLIAALCVVAAGCTTRGQVNPDVMQIATAPLTCTSKSQCDAWWARAHTWVTTHSRYE
CCCHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEECCCCCHHHHHHHHEEEEEECCEEE
VSTSTDTLIQTAGPDGGKRDLSFEITKAPNNDGTSTIGFAAHCDSSLGCKPNPWEAGADF
ECCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCH
KAFVRSSSASVATPSPSGQAAGSGGQSTASPTGEPVSQ
HHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKNLIAALCVVAAGCTTRGQVNPDVMQIATAPLTCTSKSQCDAWWARAHTWVTTHSRYE
CCCHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEECCCCCHHHHHHHHEEEEEECCEEE
VSTSTDTLIQTAGPDGGKRDLSFEITKAPNNDGTSTIGFAAHCDSSLGCKPNPWEAGADF
ECCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCH
KAFVRSSSASVATPSPSGQAAGSGGQSTASPTGEPVSQ
HHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA