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The map label for this gene is xcpS [H]

Identifier: 186477816

GI number: 186477816

Start: 3452595

End: 3453812

Strand: Direct

Name: xcpS [H]

Synonym: Bphy_3072

Alternate gene names: 186477816

Gene position: 3452595-3453812 (Clockwise)

Preceding gene: 186477815

Following gene: 186477818

Centisome position: 99.24

GC content: 63.55

Gene sequence:

>1218_bases
ATGCCGGCATTCCGCTTCGAAGCGATCGACGCCGCAGGCAAGGCGCAAAAAGGCGTACTCGATGCTGACAGCGCGCGCGG
CGCGCGTACGCAGTTGCGCGGGCAAGGTCTCACGCCGCTCGTCGTCGAACCTGCGGCGACGCGCACACGCGGCGAACGCA
GCCAGCGTCTTTCGCTGGGACGCAAACTGTCGCAACGAGAGCAGGCGATTCTCACGCGGCAGCTTGCCAGTCTGCTGATC
GCCGGCCTGCCGCTCGACGAAGCGCTCTCCGTGCTCACCGAGCAATCCGAGCGTGATTACATCCGTGAACTGATGGCCGC
GATCCGCGCGGAAGTGCTGGGCGGTCATTCGCTCGCGAATGCGCTGTCGCAGCATCCGAAAGACTTCCCCGACATCTACC
GCGCGCTCGTCGCGGCGGGCGAGCATACGGGCAAGCTCGGTCTCGTGCTGTCCCGTCTTGCTGACTACATCGAGCAACGT
AATGCGCTCAAGCAAAAGATCATTCTCGCGTTCACGTATCCGACCATCGTTACGATCATCGCCTTTGGCATCGTCACGTT
CCTGCTGAGCTATGTGGTGCCGCAGGTCGTCAACGTGTTCGCGAGCACGAAGCAGCAACTGCCGTTTCTCACCATCATGA
TGATGGCGCTCTCCGGCTTCGTACGGAATTACTGGTGGGCGATGCTGATCGCCGTGGTGATTGTCGTGTATGTGGTGCGC
TCGATACTCGCTCAGCCTGGCCCGCGGCTTGCGTTCGACCGCTGGACGCTGACAGCCCCCCTCTTCGGCAAGCTCGTGCG
CGGCTACAACACCGTGCGCTTTGCGAGCACGCTGGGCATCCTGACGGCGGCGGGCGTGCCGATTCTGCGCGCGCTGCAGG
CCGCAAGCGAAACGCTCAGCAACCGCGCGATGCGAGACAACATCGACGATGCCATCGTGCGCGTGCGCGAAGGCACGTCG
CTGTCGCGTGCGCTCGGCAACACGAAGACGTTTCCGCCCGTGCTCGTGCACCTGATCCGTTCGGGCGAAGCAACGGGCGA
CGTGACGACGATGCTCGACCGCGCGGCCGAAGGTGAAGCGCGTGAGCTGGAGCGGCGCACGATGTTTCTGACGAGTTTGC
TGGAACCGCTGCTGATTCTGGCGATGGGCGGCGTGGTGCTGGTGATCGTGCTAGCCGTGATGCTGCCGATCATCGAGCTG
AACAACCTGGTGCAGTGA

Upstream 100 bases:

>100_bases
CAAGGCATGCGCACCTTGCGCGAGGACGGCGAACGATGGCTCGCGTCGGGCATGACGTCGCTCGAAGAAGTGATACGCGT
GACGGGCGGGGTCTGAGGGC

Downstream 100 bases:

>100_bases
CGGTGCACGTTGAGTGTCGTCGTGCGCAAGCGCGTGAAAGCGTTGCAAGCTGGGCCGATGCTTCGGGGTTGCATCGGCGC
GGCAGAGAATGAAATCAGCG

Product: general secretion pathway protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPAFRFEAIDAAGKAQKGVLDADSARGARTQLRGQGLTPLVVEPAATRTRGERSQRLSLGRKLSQREQAILTRQLASLLI
AGLPLDEALSVLTEQSERDYIRELMAAIRAEVLGGHSLANALSQHPKDFPDIYRALVAAGEHTGKLGLVLSRLADYIEQR
NALKQKIILAFTYPTIVTIIAFGIVTFLLSYVVPQVVNVFASTKQQLPFLTIMMMALSGFVRNYWWAMLIAVVIVVYVVR
SILAQPGPRLAFDRWTLTAPLFGKLVRGYNTVRFASTLGILTAAGVPILRALQAASETLSNRAMRDNIDDAIVRVREGTS
LSRALGNTKTFPPVLVHLIRSGEATGDVTTMLDRAAEGEARELERRTMFLTSLLEPLLILAMGGVVLVIVLAVMLPIIEL
NNLVQ

Sequences:

>Translated_405_residues
MPAFRFEAIDAAGKAQKGVLDADSARGARTQLRGQGLTPLVVEPAATRTRGERSQRLSLGRKLSQREQAILTRQLASLLI
AGLPLDEALSVLTEQSERDYIRELMAAIRAEVLGGHSLANALSQHPKDFPDIYRALVAAGEHTGKLGLVLSRLADYIEQR
NALKQKIILAFTYPTIVTIIAFGIVTFLLSYVVPQVVNVFASTKQQLPFLTIMMMALSGFVRNYWWAMLIAVVIVVYVVR
SILAQPGPRLAFDRWTLTAPLFGKLVRGYNTVRFASTLGILTAAGVPILRALQAASETLSNRAMRDNIDDAIVRVREGTS
LSRALGNTKTFPPVLVHLIRSGEATGDVTTMLDRAAEGEARELERRTMFLTSLLEPLLILAMGGVVLVIVLAVMLPIIEL
NNLVQ
>Mature_404_residues
PAFRFEAIDAAGKAQKGVLDADSARGARTQLRGQGLTPLVVEPAATRTRGERSQRLSLGRKLSQREQAILTRQLASLLIA
GLPLDEALSVLTEQSERDYIRELMAAIRAEVLGGHSLANALSQHPKDFPDIYRALVAAGEHTGKLGLVLSRLADYIEQRN
ALKQKIILAFTYPTIVTIIAFGIVTFLLSYVVPQVVNVFASTKQQLPFLTIMMMALSGFVRNYWWAMLIAVVIVVYVVRS
ILAQPGPRLAFDRWTLTAPLFGKLVRGYNTVRFASTLGILTAAGVPILRALQAASETLSNRAMRDNIDDAIVRVREGTSL
SRALGNTKTFPPVLVHLIRSGEATGDVTTMLDRAAEGEARELERRTMFLTSLLEPLLILAMGGVVLVIVLAVMLPIIELN
NLVQ

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=402, Percent_Identity=34.8258706467662, Blast_Score=255, Evalue=3e-69,
Organism=Escherichia coli, GI1786295, Length=402, Percent_Identity=28.1094527363184, Blast_Score=150, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44290; Mature: 44159

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFRFEAIDAAGKAQKGVLDADSARGARTQLRGQGLTPLVVEPAATRTRGERSQRLSLG
CCCCHHHHHHHCCCHHCCCCCCCCCCCHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHH
RKLSQREQAILTRQLASLLIAGLPLDEALSVLTEQSERDYIRELMAAIRAEVLGGHSLAN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ALSQHPKDFPDIYRALVAAGEHTGKLGLVLSRLADYIEQRNALKQKIILAFTYPTIVTII
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFGIVTFLLSYVVPQVVNVFASTKQQLPFLTIMMMALSGFVRNYWWAMLIAVVIVVYVVR
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILAQPGPRLAFDRWTLTAPLFGKLVRGYNTVRFASTLGILTAAGVPILRALQAASETLS
HHHCCCCCCCEECCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NRAMRDNIDDAIVRVREGTSLSRALGNTKTFPPVLVHLIRSGEATGDVTTMLDRAAEGEA
HHHHHCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHH
RELERRTMFLTSLLEPLLILAMGGVVLVIVLAVMLPIIELNNLVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAFRFEAIDAAGKAQKGVLDADSARGARTQLRGQGLTPLVVEPAATRTRGERSQRLSLG
CCCHHHHHHHCCCHHCCCCCCCCCCCHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHH
RKLSQREQAILTRQLASLLIAGLPLDEALSVLTEQSERDYIRELMAAIRAEVLGGHSLAN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ALSQHPKDFPDIYRALVAAGEHTGKLGLVLSRLADYIEQRNALKQKIILAFTYPTIVTII
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFGIVTFLLSYVVPQVVNVFASTKQQLPFLTIMMMALSGFVRNYWWAMLIAVVIVVYVVR
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILAQPGPRLAFDRWTLTAPLFGKLVRGYNTVRFASTLGILTAAGVPILRALQAASETLS
HHHCCCCCCCEECCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NRAMRDNIDDAIVRVREGTSLSRALGNTKTFPPVLVHLIRSGEATGDVTTMLDRAAEGEA
HHHHHCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHH
RELERRTMFLTSLLEPLLILAMGGVVLVIVLAVMLPIIELNNLVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]