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The map label for this gene is gspD [H]

Identifier: 186477814

GI number: 186477814

Start: 3448683

End: 3451046

Strand: Direct

Name: gspD [H]

Synonym: Bphy_3070

Alternate gene names: 186477814

Gene position: 3448683-3451046 (Clockwise)

Preceding gene: 186477811

Following gene: 186477815

Centisome position: 99.12

GC content: 63.2

Gene sequence:

>2364_bases
ATGAGAAGAAATCGTATGGCATTGCGTCGCGTCGCGATGGCGTTGCTGGTCGCTGGAACGATCACCTCGCAGATCGCGCA
CGCACAGGTGACGCTCAATTTCGTGAACGCCGACATCGATCAGGTGGCGCGGGCGATTGGCGCGGCCACGGGAAAGACGA
TCATCGTCGACCCGCGCGTGAAAGGGCAACTGAACCTGGTTTCCGAAAACCCAGTTCCGGAAGATCAGGCGCTGAAGACC
TTGCAGTCCGCACTGCGGATGCAGGGCTTTTCGCTCGTGCAGGATCACGGCGTGCTGAAGGTCGTACCTGAAGCGGACGC
GAAGCTTCAGGGCGTGCCGACCTACGTCGGAAACGCACCCGCGGCGCGCGGCGATCAGGTGGTCACGCAGGTCTTCCAGC
TGAAGAACGAATCGGCCAACAACCTGCTGCCCGTGCTGCGTCCGCTGATCTCGCCGAACAACACGGTTGCGGCGTATCCG
TCGAACAACACGATCGTCGTCACGGACTATGCGGACAACGTGCGCCGCATCGCGCAGATCATCGCGGGCGTCGATACGGC
GGCCGGCCAGCAGGTGCAGGTTGTGCCGCTGAAGAACGCGAATGCGATCGACGTCGCCACGCAGATGGCGAAAATGCTCG
ATCCCGGTACGATCGGCAACACGGATGCGACACTGAAGGTCTCCGTCCAGGCCGATCCTCGCACCAATTCGCTGCTGTTG
CGCGCGTCGAACGCGGGGCGTCTCGCGGCGGCGAAGTCGCTCGCGAAGCAACTGGATGCTGCAACCGGCCAGCCCGGGAA
CATGCACGTCGTGCCCTTGCGCAACGCAGACGCCGTGCGTCTCGCGAAGACGCTGCGCGGCATGCTCGGCAAGGGTGGCG
GCGGCAACGAATCGTCGTCGTCTTCAGGTGGCAGCAGCGCTGCGAACTCGTTCAACCAGAACAATTCGCCCTCGTCGACG
GGCACCTCCGGCAACCCGCCTTTACCGTCGGGTTCGATGGGCGGTCAGTCGTCGTCATTGGGCAGCAATCCGCTGGGCGC
CGGCGGCGGCGGGGCCGGCGGCGGCTATGGCGGCCAGGGTAGCAGCAACGACTTTCTCGGCGAGAAGGAAAGCAGCAACG
AAGACAATCAGCCGGGCGGCATGATCCAGGCCGACGCGTCGACGAACTCGCTGATCATCACTGCGTCAGACCCGGTTTAC
CGCAATCTGCGCACTGTGATCGACCAGCTCGACATCCGCCGTCCTCAGGTCTATATCGAAGCGCTGATCGTCGAACTGAA
CTCGAATACGAACGCCAACCTGGGCATCCAGTGGCAGATCGGCAGCGGCAACGTGTTCGCGGGCACCAACCTTGCCACGG
GCAGCGGCAACAGCATCATCAACCTGACGGCGGCTGCGGCCACGGGCGGCATCGCGAGCGCGCTTGCGACGCAAAATCTC
CAGCAAGGCTTGAACGTCGGCTGGGTGCATAACCTGTTCGGCGTGAACGGGCTCGGCGCGTTGCTGCAGGCGCTGTCGCA
GACGGCCGACGCCAATGTGCTGTCCACGCCTAACCTCATCACGCTCGACAACCAGGAAGCGAAGATCGTCGTGGGCACGA
ACGTGCCGATCCAGACAGGCTCCTATTCGAACCTGACGAGCAGCACGGCGACCACTGCGTTCAACACATTCGACCGTATC
GACGTGGGTCTGACGCTGCACATCAAGCCACAGATCACTGATGGCGGCATCCTGAAGCTGCAGTTGTACACGGAAGATTC
GGCGATCGTGGCAGGCACGACCAACGTGACGACCAACCCGGCCGGCCCGGAATTCACGAAGCGTTCGATCCAGTCGACCG
TGCTGGCCGACAACGGCGAGATCATCGTGCTGGGGGGCCTGATGCAGGACAATTACCAGGTCACCAACAGCAAGGTGCCG
CTGCTCGGCGACATCCCGTGGATCGGCCAGCTGTTCCGCTCGGAAAACAAGACCCGCGCGAAGACGAACCTGCTGGTGTT
CCTGCGTCCGGTGATCATCGCCGACCGTGCGACGGCGCAAGCGGTGACGGCGAACCGCTATGACTACATCCAGGGCGTGA
CGGGTGCGTACAAGTCGGACAACAATCTGATCAGGGACAAGGACGATCCCGTGGTGCCGCCGATGCCCGTTGGCCCGAAC
GAGGGCGGATCGACGTTGAATCTGTTCGATCTCGACAAGATGCGGCGTGAACAGGCGCTTGGCGTGCCGCCGCAGCAGCC
GCAAATGCAACCGCAGGTTCAGCCCCAAGTTCAGCCGCAGACGCAACCGCAGCCGCTGCAGGTCGAACCGGCGCAAACCG
TGCCGGCTCAACCGGCCACGAGTACGCAAAAGGTGCAGCCGTGA

Upstream 100 bases:

>100_bases
GCCATAGCGCGCCTTGTCAGACCGAGGACGATTGGCGTCGGCCGTCGTCCACTGTGCAAGACCGTCGGCGGATCACAACG
TCGGCTTCGAAATCATATCC

Downstream 100 bases:

>100_bases
GCTCGACGCCGCTTTCCGGGCCGCACGCCTCTGCCGGATCATCGGACGATGCGCGCGGCGCGCCGGAAACGCCCCCGACC
CAGACAGGACGCGAAGCGCC

Product: general secretion pathway protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 787; Mature: 787

Protein sequence:

>787_residues
MRRNRMALRRVAMALLVAGTITSQIAHAQVTLNFVNADIDQVARAIGAATGKTIIVDPRVKGQLNLVSENPVPEDQALKT
LQSALRMQGFSLVQDHGVLKVVPEADAKLQGVPTYVGNAPAARGDQVVTQVFQLKNESANNLLPVLRPLISPNNTVAAYP
SNNTIVVTDYADNVRRIAQIIAGVDTAAGQQVQVVPLKNANAIDVATQMAKMLDPGTIGNTDATLKVSVQADPRTNSLLL
RASNAGRLAAAKSLAKQLDAATGQPGNMHVVPLRNADAVRLAKTLRGMLGKGGGGNESSSSSGGSSAANSFNQNNSPSST
GTSGNPPLPSGSMGGQSSSLGSNPLGAGGGGAGGGYGGQGSSNDFLGEKESSNEDNQPGGMIQADASTNSLIITASDPVY
RNLRTVIDQLDIRRPQVYIEALIVELNSNTNANLGIQWQIGSGNVFAGTNLATGSGNSIINLTAAAATGGIASALATQNL
QQGLNVGWVHNLFGVNGLGALLQALSQTADANVLSTPNLITLDNQEAKIVVGTNVPIQTGSYSNLTSSTATTAFNTFDRI
DVGLTLHIKPQITDGGILKLQLYTEDSAIVAGTTNVTTNPAGPEFTKRSIQSTVLADNGEIIVLGGLMQDNYQVTNSKVP
LLGDIPWIGQLFRSENKTRAKTNLLVFLRPVIIADRATAQAVTANRYDYIQGVTGAYKSDNNLIRDKDDPVVPPMPVGPN
EGGSTLNLFDLDKMRREQALGVPPQQPQMQPQVQPQVQPQTQPQPLQVEPAQTVPAQPATSTQKVQP

Sequences:

>Translated_787_residues
MRRNRMALRRVAMALLVAGTITSQIAHAQVTLNFVNADIDQVARAIGAATGKTIIVDPRVKGQLNLVSENPVPEDQALKT
LQSALRMQGFSLVQDHGVLKVVPEADAKLQGVPTYVGNAPAARGDQVVTQVFQLKNESANNLLPVLRPLISPNNTVAAYP
SNNTIVVTDYADNVRRIAQIIAGVDTAAGQQVQVVPLKNANAIDVATQMAKMLDPGTIGNTDATLKVSVQADPRTNSLLL
RASNAGRLAAAKSLAKQLDAATGQPGNMHVVPLRNADAVRLAKTLRGMLGKGGGGNESSSSSGGSSAANSFNQNNSPSST
GTSGNPPLPSGSMGGQSSSLGSNPLGAGGGGAGGGYGGQGSSNDFLGEKESSNEDNQPGGMIQADASTNSLIITASDPVY
RNLRTVIDQLDIRRPQVYIEALIVELNSNTNANLGIQWQIGSGNVFAGTNLATGSGNSIINLTAAAATGGIASALATQNL
QQGLNVGWVHNLFGVNGLGALLQALSQTADANVLSTPNLITLDNQEAKIVVGTNVPIQTGSYSNLTSSTATTAFNTFDRI
DVGLTLHIKPQITDGGILKLQLYTEDSAIVAGTTNVTTNPAGPEFTKRSIQSTVLADNGEIIVLGGLMQDNYQVTNSKVP
LLGDIPWIGQLFRSENKTRAKTNLLVFLRPVIIADRATAQAVTANRYDYIQGVTGAYKSDNNLIRDKDDPVVPPMPVGPN
EGGSTLNLFDLDKMRREQALGVPPQQPQMQPQVQPQVQPQTQPQPLQVEPAQTVPAQPATSTQKVQP
>Mature_787_residues
MRRNRMALRRVAMALLVAGTITSQIAHAQVTLNFVNADIDQVARAIGAATGKTIIVDPRVKGQLNLVSENPVPEDQALKT
LQSALRMQGFSLVQDHGVLKVVPEADAKLQGVPTYVGNAPAARGDQVVTQVFQLKNESANNLLPVLRPLISPNNTVAAYP
SNNTIVVTDYADNVRRIAQIIAGVDTAAGQQVQVVPLKNANAIDVATQMAKMLDPGTIGNTDATLKVSVQADPRTNSLLL
RASNAGRLAAAKSLAKQLDAATGQPGNMHVVPLRNADAVRLAKTLRGMLGKGGGGNESSSSSGGSSAANSFNQNNSPSST
GTSGNPPLPSGSMGGQSSSLGSNPLGAGGGGAGGGYGGQGSSNDFLGEKESSNEDNQPGGMIQADASTNSLIITASDPVY
RNLRTVIDQLDIRRPQVYIEALIVELNSNTNANLGIQWQIGSGNVFAGTNLATGSGNSIINLTAAAATGGIASALATQNL
QQGLNVGWVHNLFGVNGLGALLQALSQTADANVLSTPNLITLDNQEAKIVVGTNVPIQTGSYSNLTSSTATTAFNTFDRI
DVGLTLHIKPQITDGGILKLQLYTEDSAIVAGTTNVTTNPAGPEFTKRSIQSTVLADNGEIIVLGGLMQDNYQVTNSKVP
LLGDIPWIGQLFRSENKTRAKTNLLVFLRPVIIADRATAQAVTANRYDYIQGVTGAYKSDNNLIRDKDDPVVPPMPVGPN
EGGSTLNLFDLDKMRREQALGVPPQQPQMQPQVQPQVQPQTQPQPLQVEPAQTVPAQPATSTQKVQP

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=518, Percent_Identity=33.011583011583, Blast_Score=207, Evalue=2e-54,
Organism=Escherichia coli, GI1789793, Length=297, Percent_Identity=26.5993265993266, Blast_Score=100, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 82257; Mature: 82257

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNRMALRRVAMALLVAGTITSQIAHAQVTLNFVNADIDQVARAIGAATGKTIIVDPRV
CCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHCCCCCEEEECCCC
KGQLNLVSENPVPEDQALKTLQSALRMQGFSLVQDHGVLKVVPEADAKLQGVPTYVGNAP
CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCC
AARGDQVVTQVFQLKNESANNLLPVLRPLISPNNTVAAYPSNNTIVVTDYADNVRRIAQI
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHHHHHH
IAGVDTAAGQQVQVVPLKNANAIDVATQMAKMLDPGTIGNTDATLKVSVQADPRTNSLLL
HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEE
RASNAGRLAAAKSLAKQLDAATGQPGNMHVVPLRNADAVRLAKTLRGMLGKGGGGNESSS
EECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
SSGGSSAANSFNQNNSPSSTGTSGNPPLPSGSMGGQSSSLGSNPLGAGGGGAGGGYGGQG
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSNDFLGEKESSNEDNQPGGMIQADASTNSLIITASDPVYRNLRTVIDQLDIRRPQVYIE
CCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHEEEE
ALIVELNSNTNANLGIQWQIGSGNVFAGTNLATGSGNSIINLTAAAATGGIASALATQNL
EEEEEECCCCCCCEEEEEEECCCCEEECCEEECCCCCCEEEEEEHHHCCHHHHHHHHHHH
QQGLNVGWVHNLFGVNGLGALLQALSQTADANVLSTPNLITLDNQEAKIVVGTNVPIQTG
HHCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCEECCCCEEEECCCCEEEEEECCCCCCCC
SYSNLTSSTATTAFNTFDRIDVGLTLHIKPQITDGGILKLQLYTEDSAIVAGTTNVTTNP
CCCCCCCCHHHHHHCCCCEEEEEEEEEEEEEECCCCEEEEEEEECCCEEEEECCCCCCCC
AGPEFTKRSIQSTVLADNGEIIVLGGLMQDNYQVTNSKVPLLGDIPWIGQLFRSENKTRA
CCCHHHHHHHHHHEEECCCCEEEEECEECCCEEECCCCCCEEECCHHHHHHHHCCCCCHH
KTNLLVFLRPVIIADRATAQAVTANRYDYIQGVTGAYKSDNNLIRDKDDPVVPPMPVGPN
HHEEEEEEEEEEEECCCHHHHHHCCCHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC
EGGSTLNLFDLDKMRREQALGVPPQQPQMQPQVQPQVQPQTQPQPLQVEPAQTVPAQPAT
CCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
STQKVQP
CCCCCCC
>Mature Secondary Structure
MRRNRMALRRVAMALLVAGTITSQIAHAQVTLNFVNADIDQVARAIGAATGKTIIVDPRV
CCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHCCCCCEEEECCCC
KGQLNLVSENPVPEDQALKTLQSALRMQGFSLVQDHGVLKVVPEADAKLQGVPTYVGNAP
CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCC
AARGDQVVTQVFQLKNESANNLLPVLRPLISPNNTVAAYPSNNTIVVTDYADNVRRIAQI
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHHHHHH
IAGVDTAAGQQVQVVPLKNANAIDVATQMAKMLDPGTIGNTDATLKVSVQADPRTNSLLL
HHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEE
RASNAGRLAAAKSLAKQLDAATGQPGNMHVVPLRNADAVRLAKTLRGMLGKGGGGNESSS
EECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
SSGGSSAANSFNQNNSPSSTGTSGNPPLPSGSMGGQSSSLGSNPLGAGGGGAGGGYGGQG
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSNDFLGEKESSNEDNQPGGMIQADASTNSLIITASDPVYRNLRTVIDQLDIRRPQVYIE
CCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHEEEE
ALIVELNSNTNANLGIQWQIGSGNVFAGTNLATGSGNSIINLTAAAATGGIASALATQNL
EEEEEECCCCCCCEEEEEEECCCCEEECCEEECCCCCCEEEEEEHHHCCHHHHHHHHHHH
QQGLNVGWVHNLFGVNGLGALLQALSQTADANVLSTPNLITLDNQEAKIVVGTNVPIQTG
HHCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCEECCCCEEEECCCCEEEEEECCCCCCCC
SYSNLTSSTATTAFNTFDRIDVGLTLHIKPQITDGGILKLQLYTEDSAIVAGTTNVTTNP
CCCCCCCCHHHHHHCCCCEEEEEEEEEEEEEECCCCEEEEEEEECCCEEEEECCCCCCCC
AGPEFTKRSIQSTVLADNGEIIVLGGLMQDNYQVTNSKVPLLGDIPWIGQLFRSENKTRA
CCCHHHHHHHHHHEEECCCCEEEEECEECCCEEECCCCCCEEECCHHHHHHHHCCCCCHH
KTNLLVFLRPVIIADRATAQAVTANRYDYIQGVTGAYKSDNNLIRDKDDPVVPPMPVGPN
HHEEEEEEEEEEEECCCHHHHHHCCCHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC
EGGSTLNLFDLDKMRREQALGVPPQQPQMQPQVQPQVQPQTQPQPLQVEPAQTVPAQPAT
CCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
STQKVQP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]