| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477809
Identifier: 186477809
GI number: 186477809
Start: 3441460
End: 3442662
Strand: Reverse
Name: 186477809
Synonym: Bphy_3065
Alternate gene names: NA
Gene position: 3442662-3441460 (Counterclockwise)
Preceding gene: 186477810
Following gene: 186477808
Centisome position: 98.95
GC content: 62.76
Gene sequence:
>1203_bases ATGAAGTCGGCGTTTTCATTTTTTCCAGGCTGGCCGCTCACGCCCGATGCGATTTTCTGGGCTGGCCTTGCGCTGCTTGC CGCGGGTCTCGTCGGCGAGCTGTGTTATCGCGCGTGGCACTTGCCGCGCATTTCCGGCTATGCGGTGATCGGCCTGATCG CCGGCGCGGCGGGATCAGGGGTGATCGACGCGGAATCGGCAAGCACAGCGCGTCCGCTGCTCGATGTCGCGCTCGGCCTG CTGCTGTTCGAGCTTGGAAGCAGGCTGGATTTACGCTGGATTCGCCGCAACACATGGCTGATCGTGTCGAGCGTCGTGGA ATCGACGCTGACGTTCATCCTGGTGCTGCTGGTGCTGGTGTTTCTCAACGTGTCGACGGTGACGGCGCTCGTGCTCGCGT CGATCGCGATGGCGACCTCGCCCGCGATGGTGATCCAGCTGAAGACGGAATTGCGTGCGGAGGGCCAGGTCACGCAGCGC CTGATGACGCTGACGGCGCTCAACAGCATGTACGCGGTGGTCATCGAGAAGCTCGCGGCCGGCTGGCTGCATCAGGAGGC GTACGGCAACGTGTTCGCGACGATTCTTCAACCGCTTTATCTGCTGATCGGCTCACTGATCCTCGCGTATCTGCTTGCGC GCACCATCACGTTCTTTTACAAGCGTATGAACCTGCAGGACGAACACTCGTTCGTCGCGCTGTTCGGCCTCGTGCTGCTC GCGATCGCGCTCGCGCACATCTTCAAGCTGTCGACCATCCTCAGCCTGCTCGCTGCCGGCATCATCGTGAAGAATCTCGA AGCGCGTCCGCAACTGTGGCCGCAGCACTTCGGCACGGCCGGCTGGCTGCTGACGGTGATTCTGTTCGTGCTCACGCTGA CGACGTTCGAATGGCGCGACATCGCAATCGGCGGCGTGGCCGCGCTGGGGCTGATCGTTGCACGGCTGATCGCGAAGCTG GTCGGCGTGCTGGCGTTCGCGAAGCCGAGCGGGCTCCATATGAAGCAGGGCGTGGCGCTCGGTCTGTCGCTGTCGCCGAT GTCGGCGCTCGCCTATCTGCTGGTCGACGATACGTACCAGCTTTATCCGAATTTCGACCCGACGCTGCGCGCAATCACGA TGTGTTCGATCGTCGTGTTGCAACTCGTCGGACCGTGGCTCGTATATCGCTCGCTCGCGCTCGTCGGCGAACGCCGCGAG TAA
Upstream 100 bases:
>100_bases GTGAACCGGTCGCGGCAACGGATGCGGCCCGCGGCTTGCGTGCTGCCGGCGTCTGCCCGTTCGCGTTGCCTTCGGTTGCT GCAAAGGAGAAGCCACCACG
Downstream 100 bases:
>100_bases AGCGGCGAAGAGACACCGGGCCGACACGTTTCGGCCCGACAGCGCTCAGGTTGTTCACGCAGCTCATACATCTGGCTGCA GCATTCGACAGTCACTCCGG
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: Na/H+ Antiporter; Transmembrane Protein; Sodium/Hydrogen Exchanger Family Protein; Na+/H+ Antiporters; Na/H Antiporter
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MKSAFSFFPGWPLTPDAIFWAGLALLAAGLVGELCYRAWHLPRISGYAVIGLIAGAAGSGVIDAESASTARPLLDVALGL LLFELGSRLDLRWIRRNTWLIVSSVVESTLTFILVLLVLVFLNVSTVTALVLASIAMATSPAMVIQLKTELRAEGQVTQR LMTLTALNSMYAVVIEKLAAGWLHQEAYGNVFATILQPLYLLIGSLILAYLLARTITFFYKRMNLQDEHSFVALFGLVLL AIALAHIFKLSTILSLLAAGIIVKNLEARPQLWPQHFGTAGWLLTVILFVLTLTTFEWRDIAIGGVAALGLIVARLIAKL VGVLAFAKPSGLHMKQGVALGLSLSPMSALAYLLVDDTYQLYPNFDPTLRAITMCSIVVLQLVGPWLVYRSLALVGERRE
Sequences:
>Translated_400_residues MKSAFSFFPGWPLTPDAIFWAGLALLAAGLVGELCYRAWHLPRISGYAVIGLIAGAAGSGVIDAESASTARPLLDVALGL LLFELGSRLDLRWIRRNTWLIVSSVVESTLTFILVLLVLVFLNVSTVTALVLASIAMATSPAMVIQLKTELRAEGQVTQR LMTLTALNSMYAVVIEKLAAGWLHQEAYGNVFATILQPLYLLIGSLILAYLLARTITFFYKRMNLQDEHSFVALFGLVLL AIALAHIFKLSTILSLLAAGIIVKNLEARPQLWPQHFGTAGWLLTVILFVLTLTTFEWRDIAIGGVAALGLIVARLIAKL VGVLAFAKPSGLHMKQGVALGLSLSPMSALAYLLVDDTYQLYPNFDPTLRAITMCSIVVLQLVGPWLVYRSLALVGERRE >Mature_400_residues MKSAFSFFPGWPLTPDAIFWAGLALLAAGLVGELCYRAWHLPRISGYAVIGLIAGAAGSGVIDAESASTARPLLDVALGL LLFELGSRLDLRWIRRNTWLIVSSVVESTLTFILVLLVLVFLNVSTVTALVLASIAMATSPAMVIQLKTELRAEGQVTQR LMTLTALNSMYAVVIEKLAAGWLHQEAYGNVFATILQPLYLLIGSLILAYLLARTITFFYKRMNLQDEHSFVALFGLVLL AIALAHIFKLSTILSLLAAGIIVKNLEARPQLWPQHFGTAGWLLTVILFVLTLTTFEWRDIAIGGVAALGLIVARLIAKL VGVLAFAKPSGLHMKQGVALGLSLSPMSALAYLLVDDTYQLYPNFDPTLRAITMCSIVVLQLVGPWLVYRSLALVGERRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43518; Mature: 43518
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSAFSFFPGWPLTPDAIFWAGLALLAAGLVGELCYRAWHLPRISGYAVIGLIAGAAGSG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC VIDAESASTARPLLDVALGLLLFELGSRLDLRWIRRNTWLIVSSVVESTLTFILVLLVLV CEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH FLNVSTVTALVLASIAMATSPAMVIQLKTELRAEGQVTQRLMTLTALNSMYAVVIEKLAA HHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH GWLHQEAYGNVFATILQPLYLLIGSLILAYLLARTITFFYKRMNLQDEHSFVALFGLVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AIALAHIFKLSTILSLLAAGIIVKNLEARPQLWPQHFGTAGWLLTVILFVLTLTTFEWRD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCHHH IAIGGVAALGLIVARLIAKLVGVLAFAKPSGLHMKQGVALGLSLSPMSALAYLLVDDTYQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCEEECCCCCHHHHHHHHHHCCCHH LYPNFDPTLRAITMCSIVVLQLVGPWLVYRSLALVGERRE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKSAFSFFPGWPLTPDAIFWAGLALLAAGLVGELCYRAWHLPRISGYAVIGLIAGAAGSG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC VIDAESASTARPLLDVALGLLLFELGSRLDLRWIRRNTWLIVSSVVESTLTFILVLLVLV CEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH FLNVSTVTALVLASIAMATSPAMVIQLKTELRAEGQVTQRLMTLTALNSMYAVVIEKLAA HHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH GWLHQEAYGNVFATILQPLYLLIGSLILAYLLARTITFFYKRMNLQDEHSFVALFGLVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH AIALAHIFKLSTILSLLAAGIIVKNLEARPQLWPQHFGTAGWLLTVILFVLTLTTFEWRD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCHHH IAIGGVAALGLIVARLIAKLVGVLAFAKPSGLHMKQGVALGLSLSPMSALAYLLVDDTYQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCEEECCCCCHHHHHHHHHHCCCHH LYPNFDPTLRAITMCSIVVLQLVGPWLVYRSLALVGERRE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA