| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477799
Identifier: 186477799
GI number: 186477799
Start: 3432195
End: 3432446
Strand: Direct
Name: 186477799
Synonym: Bphy_3055
Alternate gene names: NA
Gene position: 3432195-3432446 (Clockwise)
Preceding gene: 186477797
Following gene: 186477801
Centisome position: 98.65
GC content: 55.95
Gene sequence:
>252_bases GTGCGAGCCAGATCGCGCAACGCACCGGGCTGCAGAACGTCGAGGGGCCACGACGCGATCAGTCGGCAATTCAAGTTCGC CGACTTCAACGAAGCATTCCGCTTCAAGACGCGCGTCGCGATCAAGGCTCAGCAGATCGACCATCACCCTTTCAACGTCT ACAGTAACGTCGACATCACGCTATCGACGCACGATGCGAATAGAATTTCCGAGCGCGCACCATTTATCGATGAAGTGGCA GCTGAAAACTGA
Upstream 100 bases:
>100_bases TTTCGATGCGGGATTATCGCATTCACCTTGGTTCGGAAAACTTGCGTCCCACGCAGCTTCTAAGGTGACACGATGATCGA GAAACTTCCCTCGGAAGAAC
Downstream 100 bases:
>100_bases TGTGAGGCGTTGATTAGACGAAAGCCGGTTGCGCTTTGAAAAGTCCGGAGAAAACCCGTGGCGAAAGCGTATTGCAGGTA ATCAGGCCACCAAACCTTCA
Product: transcriptional coactivator/pterin dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MRARSRNAPGCRTSRGHDAISRQFKFADFNEAFRFKTRVAIKAQQIDHHPFNVYSNVDITLSTHDANRISERAPFIDEVA AEN
Sequences:
>Translated_83_residues MRARSRNAPGCRTSRGHDAISRQFKFADFNEAFRFKTRVAIKAQQIDHHPFNVYSNVDITLSTHDANRISERAPFIDEVA AEN >Mature_83_residues MRARSRNAPGCRTSRGHDAISRQFKFADFNEAFRFKTRVAIKAQQIDHHPFNVYSNVDITLSTHDANRISERAPFIDEVA AEN
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI4557831, Length=80, Percent_Identity=53.75, Blast_Score=82, Evalue=1e-16, Organism=Homo sapiens, GI134133240, Length=80, Percent_Identity=42.5, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115533705, Length=77, Percent_Identity=51.9480519480519, Blast_Score=83, Evalue=2e-17, Organism=Drosophila melanogaster, GI45549100, Length=65, Percent_Identity=50.7692307692308, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 9520; Mature: 9520
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARSRNAPGCRTSRGHDAISRQFKFADFNEAFRFKTRVAIKAQQIDHHPFNVYSNVDIT CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHEEHHHEEEEECCCCCCCCEEECCCEEE LSTHDANRISERAPFIDEVAAEN EECCCCHHHHHCCCCHHHHCCCC >Mature Secondary Structure MRARSRNAPGCRTSRGHDAISRQFKFADFNEAFRFKTRVAIKAQQIDHHPFNVYSNVDIT CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHEEHHHEEEEECCCCCCCCEEECCCEEE LSTHDANRISERAPFIDEVAAEN EECCCCHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA