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The map label for this gene is atpH

Identifier: 186477776

GI number: 186477776

Start: 3405373

End: 3405912

Strand: Reverse

Name: atpH

Synonym: Bphy_3030

Alternate gene names: 186477776

Gene position: 3405912-3405373 (Counterclockwise)

Preceding gene: 186477777

Following gene: 186477775

Centisome position: 97.89

GC content: 63.15

Gene sequence:

>540_bases
ATGGCCGAACTTGCAACCATCGCCCGTCCGTACGCAGAAGCGCTGTTTGGCGTGGCCGAAGCTGGTGACATCGCCGCCTG
GTCCACGCTCGTGCAGGAGCTGGCACAGGTTGCGCGTCTGCCCGATGTGCTGTCGATTGCCTCGAGCCCGAAAGTCAGCC
GTGCACAGATCAGCGACCTGCTGCTGGCCGCGGTGAAATCGCCGCTCAAGGACAATGCGCAAGCGAAGAATCTGGTTCAG
ATGCTGGTCGACAATCATCGTCTGCCGCTCTTGCCGGAAATCGCCACGCAGTTCGAAGAGTTGAAGAACGCCCGCGAAGG
TGCGGCCGATGCGTTGATCGTCAGCGCATTCCCCCTCGAAGGTGCGCAGCTGGACGGCCTCGTCGCAAGCCTCGAACGCA
AATTCAAACGCAAGCTGAAGCCGACGGTCCAGGTGGACTCGTCGCTGATCGGCGGCGTTCGCGTGACGGTCGGCGACGAA
GTGCTCGATACCTCGGTCCGCGCGCGGCTCGCCAGCATGCAGACGGCTCTGACCGCCTGA

Upstream 100 bases:

>100_bases
CCGCGCTCGCCGTGAAGGGTGCCGAACAGATCCTGAAGCGCGAAGTCGACCAGGCGGCTCACGCCGACCTGCTGAATCAA
CTCAAAGCCGAGCTCTGATC

Downstream 100 bases:

>100_bases
AGCCCTCACGTGGTTGTGGCGGCTGGCACGCAACAGAATTGACTATCAGGAGCGAATAATGCAACTCAATCCCTCTGAGA
TCAGCGAGCTGATCAAGAGC

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MAELATIARPYAEALFGVAEAGDIAAWSTLVQELAQVARLPDVLSIASSPKVSRAQISDLLLAAVKSPLKDNAQAKNLVQ
MLVDNHRLPLLPEIATQFEELKNAREGAADALIVSAFPLEGAQLDGLVASLERKFKRKLKPTVQVDSSLIGGVRVTVGDE
VLDTSVRARLASMQTALTA

Sequences:

>Translated_179_residues
MAELATIARPYAEALFGVAEAGDIAAWSTLVQELAQVARLPDVLSIASSPKVSRAQISDLLLAAVKSPLKDNAQAKNLVQ
MLVDNHRLPLLPEIATQFEELKNAREGAADALIVSAFPLEGAQLDGLVASLERKFKRKLKPTVQVDSSLIGGVRVTVGDE
VLDTSVRARLASMQTALTA
>Mature_178_residues
AELATIARPYAEALFGVAEAGDIAAWSTLVQELAQVARLPDVLSIASSPKVSRAQISDLLLAAVKSPLKDNAQAKNLVQM
LVDNHRLPLLPEIATQFEELKNAREGAADALIVSAFPLEGAQLDGLVASLERKFKRKLKPTVQVDSSLIGGVRVTVGDEV
LDTSVRARLASMQTALTA

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=174, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_BURP8 (B2JJK2)

Other databases:

- EMBL:   CP001043
- RefSeq:   YP_001859246.1
- ProteinModelPortal:   B2JJK2
- SMR:   B2JJK2
- GeneID:   6244511
- GenomeReviews:   CP001043_GR
- KEGG:   bph:Bphy_3030
- HOGENOM:   HBG668108
- OMA:   ASLERKF
- ProtClustDB:   PRK05758
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19038; Mature: 18907

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELATIARPYAEALFGVAEAGDIAAWSTLVQELAQVARLPDVLSIASSPKVSRAQISDL
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHH
LLAAVKSPLKDNAQAKNLVQMLVDNHRLPLLPEIATQFEELKNAREGAADALIVSAFPLE
HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
GAQLDGLVASLERKFKRKLKPTVQVDSSLIGGVRVTVGDEVLDTSVRARLASMQTALTA
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AELATIARPYAEALFGVAEAGDIAAWSTLVQELAQVARLPDVLSIASSPKVSRAQISDL
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHH
LLAAVKSPLKDNAQAKNLVQMLVDNHRLPLLPEIATQFEELKNAREGAADALIVSAFPLE
HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
GAQLDGLVASLERKFKRKLKPTVQVDSSLIGGVRVTVGDEVLDTSVRARLASMQTALTA
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA